Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Xcl1P47993 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC10.4□□□□□ -0.74
Xcl1P47993 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC10.4□□□□□ -0.74
Xcl1P47993 Gm12366-201ENSMUST00000121722 873 ntBASIC10.4□□□□□ -0.74
Xcl1P47993 Gm12134-201ENSMUST00000122109 520 ntBASIC10.4□□□□□ -0.74
Xcl1P47993 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC10.4□□□□□ -0.74
Xcl1P47993 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC10.4□□□□□ -0.74
Xcl1P47993 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC10.4□□□□□ -0.74
Xcl1P47993 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Gm38205-201ENSMUST00000192243 258 ntBASIC10.4□□□□□ -0.74
Xcl1P47993 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC10.4□□□□□ -0.74
Xcl1P47993 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC10.4□□□□□ -0.74
Xcl1P47993 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC10.4□□□□□ -0.74
Xcl1P47993 Gm5786-201ENSMUST00000085368 882 ntBASIC10.4□□□□□ -0.74
Xcl1P47993 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Xcl1P47993 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Xcl1P47993 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Xcl1P47993 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Xcl1P47993 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Xcl1P47993 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Xcl1P47993 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Xcl1P47993 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Xcl1P47993 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Xcl1P47993 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Xcl1P47993 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.4□□□□□ -0.75
Xcl1P47993 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Xcl1P47993 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Xcl1P47993 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Xcl1P47993 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Xcl1P47993 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.39□□□□□ -0.75
Xcl1P47993 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.39□□□□□ -0.75
Xcl1P47993 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC10.39□□□□□ -0.75
Xcl1P47993 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Gm13238-201ENSMUST00000117655 780 ntBASIC10.39□□□□□ -0.75
Xcl1P47993 Gm11421-201ENSMUST00000122124 294 ntBASIC10.39□□□□□ -0.75
Xcl1P47993 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC10.39□□□□□ -0.75
Xcl1P47993 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC10.39□□□□□ -0.75
Xcl1P47993 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC10.39□□□□□ -0.75
Xcl1P47993 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.39□□□□□ -0.75
Xcl1P47993 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Xcl1P47993 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.39□□□□□ -0.75
Xcl1P47993 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Xcl1P47993 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Xcl1P47993 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.38□□□□□ -0.75
Xcl1P47993 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Xcl1P47993 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.38□□□□□ -0.75
Xcl1P47993 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Xcl1P47993 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Xcl1P47993 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Xcl1P47993 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Xcl1P47993 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms