Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Timp3P39876 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Timp3P39876 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Timp3P39876 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Timp3P39876 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Timp3P39876 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
Timp3P39876 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Timp3P39876 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Timp3P39876 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.02□□□□□ -0.33
Timp3P39876 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.02□□□□□ -0.33
Timp3P39876 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Timp3P39876 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Gm5864-201ENSMUST00000202263 970 ntBASIC13.02□□□□□ -0.33
Timp3P39876 Gm18195-201ENSMUST00000207604 706 ntBASIC13.02□□□□□ -0.33
Timp3P39876 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Timp3P39876 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Timp3P39876 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Timp3P39876 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Timp3P39876 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Timp3P39876 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Timp3P39876 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Timp3P39876 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Timp3P39876 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Timp3P39876 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Timp3P39876 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Timp3P39876 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Gm15165-201ENSMUST00000118140 502 ntBASIC13.01□□□□□ -0.33
Timp3P39876 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.01□□□□□ -0.33
Timp3P39876 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.01□□□□□ -0.33
Timp3P39876 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.01□□□□□ -0.33
Timp3P39876 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Timp3P39876 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Timp3P39876 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Timp3P39876 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13□□□□□ -0.33
Timp3P39876 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Timp3P39876 Gm13884-201ENSMUST00000118103 829 ntBASIC13□□□□□ -0.33
Timp3P39876 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 AC114585.2-202ENSMUST00000228094 426 ntBASIC13□□□□□ -0.33
Timp3P39876 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Rps4l-201ENSMUST00000071745 943 ntBASIC13□□□□□ -0.33
Timp3P39876 Gm45212-201ENSMUST00000205831 3403 ntBASIC13□□□□□ -0.33
Timp3P39876 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13□□□□□ -0.33
Timp3P39876 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Timp3P39876 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Timp3P39876 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms