Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh4P39038 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh4P39038 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh4P39038 Gm12644-201ENSMUST00000119935 606 ntBASIC15.21■□□□□ 0.03
Cdh4P39038 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh4P39038 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cdh4P39038 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh4P39038 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.21■□□□□ 0.03
Cdh4P39038 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh4P39038 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh4P39038 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Cdh4P39038 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdh4P39038 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cdh4P39038 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.2■□□□□ 0.02
Cdh4P39038 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.2■□□□□ 0.02
Cdh4P39038 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.2■□□□□ 0.02
Cdh4P39038 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh4P39038 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Cdh4P39038 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Gm7153-201ENSMUST00000117092 455 ntBASIC15.19■□□□□ 0.02
Cdh4P39038 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.19■□□□□ 0.02
Cdh4P39038 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdh4P39038 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdh4P39038 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdh4P39038 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cdh4P39038 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Cdh4P39038 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh4P39038 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cdh4P39038 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.18■□□□□ 0.02
Cdh4P39038 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh4P39038 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Cdh4P39038 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh4P39038 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Cdh4P39038 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Birc2-201ENSMUST00000054878 378 ntBASIC15.18■□□□□ 0.02
Cdh4P39038 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh4P39038 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Cdh4P39038 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.18■□□□□ 0.02
Cdh4P39038 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh4P39038 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.17■□□□□ 0.02
Cdh4P39038 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cdh4P39038 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Gm24589-201ENSMUST00000116692 94 ntBASIC15.17■□□□□ 0.02
Cdh4P39038 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdh4P39038 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Gm25406-201ENSMUST00000157599 105 ntBASIC15.17■□□□□ 0.02
Cdh4P39038 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdh4P39038 Gm25745-201ENSMUST00000174945 133 ntBASIC15.17■□□□□ 0.02
Cdh4P39038 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdh4P39038 Gm34391-201ENSMUST00000203706 907 ntBASIC15.17■□□□□ 0.02
Cdh4P39038 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.17■□□□□ 0.02
Cdh4P39038 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdh4P39038 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms