Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nedd8P29595 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nedd8P29595 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nedd8P29595 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nedd8P29595 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Nedd8P29595 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.77□□□□□ -0.05
Nedd8P29595 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Nedd8P29595 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.77□□□□□ -0.05
Nedd8P29595 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Nedd8P29595 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.77□□□□□ -0.05
Nedd8P29595 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.77□□□□□ -0.05
Nedd8P29595 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nedd8P29595 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.76□□□□□ -0.05
Nedd8P29595 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nedd8P29595 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Nedd8P29595 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.76□□□□□ -0.05
Nedd8P29595 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.76□□□□□ -0.05
Nedd8P29595 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Nedd8P29595 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.76□□□□□ -0.05
Nedd8P29595 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Nedd8P29595 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nedd8P29595 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Nedd8P29595 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Nedd8P29595 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Nedd8P29595 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Nedd8P29595 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.75□□□□□ -0.05
Nedd8P29595 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.75□□□□□ -0.05
Nedd8P29595 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.75□□□□□ -0.05
Nedd8P29595 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.75□□□□□ -0.05
Nedd8P29595 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.75□□□□□ -0.05
Nedd8P29595 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.75□□□□□ -0.05
Nedd8P29595 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.75□□□□□ -0.05
Nedd8P29595 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.75□□□□□ -0.05
Nedd8P29595 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Nedd8P29595 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nedd8P29595 Phf7-203ENSMUST00000226565 1971 ntBASIC14.74□□□□□ -0.05
Nedd8P29595 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Nedd8P29595 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Nedd8P29595 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.74□□□□□ -0.05
Nedd8P29595 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Nedd8P29595 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
Nedd8P29595 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms