Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Zfp28P10078 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Zfp28P10078 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Zfp28P10078 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.67□□□□□ -0.06
Zfp28P10078 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.67□□□□□ -0.06
Zfp28P10078 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.67□□□□□ -0.06
Zfp28P10078 Gm3375-201ENSMUST00000203929 796 ntBASIC14.67□□□□□ -0.06
Zfp28P10078 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.67□□□□□ -0.06
Zfp28P10078 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.67□□□□□ -0.06
Zfp28P10078 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.67□□□□□ -0.06
Zfp28P10078 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.67□□□□□ -0.06
Zfp28P10078 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Zfp28P10078 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.67□□□□□ -0.06
Zfp28P10078 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Zfp28P10078 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Zfp28P10078 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.66□□□□□ -0.06
Zfp28P10078 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.66□□□□□ -0.06
Zfp28P10078 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Zfp28P10078 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Gm29257-201ENSMUST00000186115 639 ntBASIC14.66□□□□□ -0.06
Zfp28P10078 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.66□□□□□ -0.06
Zfp28P10078 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Zfp28P10078 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Zfp28P10078 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.66□□□□□ -0.06
Zfp28P10078 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Zfp28P10078 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Zfp28P10078 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.65□□□□□ -0.06
Zfp28P10078 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Gm715-201ENSMUST00000117865 831 ntBASIC14.65□□□□□ -0.06
Zfp28P10078 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
Zfp28P10078 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Zfp28P10078 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.65□□□□□ -0.06
Zfp28P10078 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.65□□□□□ -0.06
Zfp28P10078 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.65□□□□□ -0.06
Zfp28P10078 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.65□□□□□ -0.06
Zfp28P10078 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Zfp28P10078 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Zfp28P10078 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Zfp28P10078 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zfp28P10078 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Zfp28P10078 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms