Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.85□□□□□ -0.19
UbbP0CG49 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.85□□□□□ -0.19
UbbP0CG49 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.85□□□□□ -0.19
UbbP0CG49 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.85□□□□□ -0.19
UbbP0CG49 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.85□□□□□ -0.19
UbbP0CG49 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
UbbP0CG49 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.85□□□□□ -0.19
UbbP0CG49 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.85□□□□□ -0.19
UbbP0CG49 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
UbbP0CG49 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UbbP0CG49 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.84□□□□□ -0.19
UbbP0CG49 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Gm16061-201ENSMUST00000122167 857 ntBASIC13.84□□□□□ -0.19
UbbP0CG49 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.84□□□□□ -0.19
UbbP0CG49 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.84□□□□□ -0.19
UbbP0CG49 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.84□□□□□ -0.19
UbbP0CG49 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UbbP0CG49 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UbbP0CG49 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UbbP0CG49 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UbbP0CG49 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UbbP0CG49 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
UbbP0CG49 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UbbP0CG49 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.19
UbbP0CG49 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.83□□□□□ -0.19
UbbP0CG49 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UbbP0CG49 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UbbP0CG49 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
UbbP0CG49 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UbbP0CG49 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UbbP0CG49 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UbbP0CG49 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
UbbP0CG49 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.83□□□□□ -0.2
UbbP0CG49 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.83□□□□□ -0.2
UbbP0CG49 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Mir5122-201ENSMUST00000175004 89 ntBASIC13.83□□□□□ -0.2
UbbP0CG49 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.83□□□□□ -0.2
UbbP0CG49 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.83□□□□□ -0.2
UbbP0CG49 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.83□□□□□ -0.2
UbbP0CG49 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
UbbP0CG49 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
UbbP0CG49 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
UbbP0CG49 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.82□□□□□ -0.2
UbbP0CG49 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UbbP0CG49 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms