Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Col4a1P02463 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.39■□□□□ 0.7
Col4a1P02463 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.39■□□□□ 0.69
Col4a1P02463 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Col4a1P02463 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.39■□□□□ 0.69
Col4a1P02463 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Col4a1P02463 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.39■□□□□ 0.69
Col4a1P02463 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col4a1P02463 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Col4a1P02463 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Gm12008-201ENSMUST00000117791 755 ntBASIC19.38■□□□□ 0.69
Col4a1P02463 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Col4a1P02463 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC19.38■□□□□ 0.69
Col4a1P02463 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Col4a1P02463 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.38■□□□□ 0.69
Col4a1P02463 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col4a1P02463 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Col4a1P02463 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Gm11025-201ENSMUST00000140773 466 ntBASIC19.37■□□□□ 0.69
Col4a1P02463 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.37■□□□□ 0.69
Col4a1P02463 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.37■□□□□ 0.69
Col4a1P02463 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col4a1P02463 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col4a1P02463 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.37■□□□□ 0.69
Col4a1P02463 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.37■□□□□ 0.69
Col4a1P02463 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col4a1P02463 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a1P02463 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.36■□□□□ 0.69
Col4a1P02463 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col4a1P02463 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Col4a1P02463 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a1P02463 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.36■□□□□ 0.69
Col4a1P02463 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a1P02463 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a1P02463 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a1P02463 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a1P02463 Gm10499-201ENSMUST00000174094 934 ntBASIC19.36■□□□□ 0.69
Col4a1P02463 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.36■□□□□ 0.69
Col4a1P02463 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Col4a1P02463 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.36■□□□□ 0.69
Col4a1P02463 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a1P02463 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col4a1P02463 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Col4a1P02463 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.35■□□□□ 0.69
Col4a1P02463 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Col4a1P02463 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.35■□□□□ 0.69
Col4a1P02463 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col4a1P02463 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms