Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IghmP01872 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IghmP01872 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
IghmP01872 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IghmP01872 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IghmP01872 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IghmP01872 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IghmP01872 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
IghmP01872 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
IghmP01872 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
IghmP01872 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.89□□□□□ -0.03
IghmP01872 Gm11950-201ENSMUST00000121615 838 ntBASIC14.89□□□□□ -0.03
IghmP01872 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.89□□□□□ -0.03
IghmP01872 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
IghmP01872 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
IghmP01872 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IghmP01872 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IghmP01872 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IghmP01872 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.89□□□□□ -0.03
IghmP01872 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.88□□□□□ -0.03
IghmP01872 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.88□□□□□ -0.03
IghmP01872 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.88□□□□□ -0.03
IghmP01872 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
IghmP01872 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
IghmP01872 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IghmP01872 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
IghmP01872 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
IghmP01872 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.87□□□□□ -0.03
IghmP01872 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.87□□□□□ -0.03
IghmP01872 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
IghmP01872 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
IghmP01872 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IghmP01872 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IghmP01872 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IghmP01872 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IghmP01872 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IghmP01872 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IghmP01872 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IghmP01872 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms