Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cldn1O88551 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cldn1O88551 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Cldn1O88551 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.62□□□□□ -0.23
Cldn1O88551 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.62□□□□□ -0.23
Cldn1O88551 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cldn1O88551 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cldn1O88551 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.62□□□□□ -0.23
Cldn1O88551 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cldn1O88551 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cldn1O88551 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Cldn1O88551 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.61□□□□□ -0.23
Cldn1O88551 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cldn1O88551 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cldn1O88551 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Cldn1O88551 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cldn1O88551 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.61□□□□□ -0.23
Cldn1O88551 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cldn1O88551 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Cldn1O88551 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.6□□□□□ -0.23
Cldn1O88551 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.6□□□□□ -0.23
Cldn1O88551 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cldn1O88551 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cldn1O88551 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cldn1O88551 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Gm15920-201ENSMUST00000118998 402 ntBASIC13.6□□□□□ -0.23
Cldn1O88551 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.6□□□□□ -0.23
Cldn1O88551 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.6□□□□□ -0.23
Cldn1O88551 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.6□□□□□ -0.23
Cldn1O88551 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.6□□□□□ -0.23
Cldn1O88551 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cldn1O88551 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cldn1O88551 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.59□□□□□ -0.23
Cldn1O88551 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cldn1O88551 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cldn1O88551 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.59□□□□□ -0.23
Cldn1O88551 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms