Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nid2O88322 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.56■□□□□ 0.88
Nid2O88322 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.56■□□□□ 0.88
Nid2O88322 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nid2O88322 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.55■□□□□ 0.88
Nid2O88322 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nid2O88322 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nid2O88322 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC20.55■□□□□ 0.88
Nid2O88322 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC20.55■□□□□ 0.88
Nid2O88322 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC20.55■□□□□ 0.88
Nid2O88322 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.55■□□□□ 0.88
Nid2O88322 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nid2O88322 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nid2O88322 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC20.54■□□□□ 0.88
Nid2O88322 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.54■□□□□ 0.88
Nid2O88322 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nid2O88322 Grk6-207ENSMUST00000225925 2769 ntBASIC20.54■□□□□ 0.88
Nid2O88322 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Nid2O88322 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nid2O88322 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nid2O88322 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nid2O88322 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC20.53■□□□□ 0.88
Nid2O88322 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nid2O88322 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC20.53■□□□□ 0.88
Nid2O88322 Gm18057-201ENSMUST00000208220 503 ntBASIC20.53■□□□□ 0.88
Nid2O88322 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nid2O88322 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.53■□□□□ 0.88
Nid2O88322 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nid2O88322 Gm6018-201ENSMUST00000216090 1306 ntBASIC20.53■□□□□ 0.88
Nid2O88322 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.53■□□□□ 0.88
Nid2O88322 Gm11453-201ENSMUST00000117318 1007 ntBASIC20.53■□□□□ 0.88
Nid2O88322 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nid2O88322 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.53■□□□□ 0.88
Nid2O88322 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.53■□□□□ 0.88
Nid2O88322 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nid2O88322 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nid2O88322 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Nid2O88322 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nid2O88322 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Nid2O88322 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nid2O88322 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nid2O88322 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC20.52■□□□□ 0.87
Nid2O88322 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nid2O88322 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.52■□□□□ 0.87
Nid2O88322 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Nid2O88322 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Nid2O88322 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.52■□□□□ 0.87
Nid2O88322 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.52■□□□□ 0.87
Nid2O88322 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC20.52■□□□□ 0.87
Nid2O88322 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.51■□□□□ 0.87
Nid2O88322 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nid2O88322 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms