Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pja1O55176 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pja1O55176 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pja1O55176 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.79■□□□□ 0.28
Pja1O55176 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pja1O55176 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Pja1O55176 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pja1O55176 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.79■□□□□ 0.28
Pja1O55176 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.79■□□□□ 0.28
Pja1O55176 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.79■□□□□ 0.28
Pja1O55176 Gm43799-201ENSMUST00000201845 579 ntBASIC16.79■□□□□ 0.28
Pja1O55176 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.79■□□□□ 0.28
Pja1O55176 Gm21559-201ENSMUST00000220638 855 ntBASIC16.79■□□□□ 0.28
Pja1O55176 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Gm8587-201ENSMUST00000076538 843 ntBASIC16.79■□□□□ 0.28
Pja1O55176 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pja1O55176 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pja1O55176 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pja1O55176 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Pja1O55176 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.78■□□□□ 0.28
Pja1O55176 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pja1O55176 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Pja1O55176 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.78■□□□□ 0.28
Pja1O55176 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.78■□□□□ 0.28
Pja1O55176 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.78■□□□□ 0.28
Pja1O55176 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.78■□□□□ 0.28
Pja1O55176 BC037039-201ENSMUST00000192003 2205 ntBASIC16.78■□□□□ 0.28
Pja1O55176 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.78■□□□□ 0.28
Pja1O55176 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Pja1O55176 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pja1O55176 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pja1O55176 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pja1O55176 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Pja1O55176 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pja1O55176 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pja1O55176 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pja1O55176 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pja1O55176 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pja1O55176 Gm10052-201ENSMUST00000168019 960 ntBASIC16.77■□□□□ 0.28
Pja1O55176 Mir6404-201ENSMUST00000183699 94 ntBASIC16.77■□□□□ 0.28
Pja1O55176 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.77■□□□□ 0.28
Pja1O55176 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.77■□□□□ 0.28
Pja1O55176 Gm7729-201ENSMUST00000050143 801 ntBASIC16.77■□□□□ 0.28
Pja1O55176 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.77■□□□□ 0.28
Pja1O55176 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pja1O55176 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pja1O55176 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pja1O55176 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pja1O55176 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.76■□□□□ 0.27
Pja1O55176 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pja1O55176 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Gm27389-201ENSMUST00000183622 195 ntBASIC16.76■□□□□ 0.27
Pja1O55176 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.76■□□□□ 0.27
Pja1O55176 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pja1O55176 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms