Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Prob1-201ENSMUST00000097619 3021 ntBASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13d-3J3QMG8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Gm14859-201ENSMUST00000117752 357 ntBASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-3J3QMG8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-3J3QMG8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Gm27357-201ENSMUST00000183754 135 ntBASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Gm44454-201ENSMUST00000198541 138 ntBASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 App-207ENSMUST00000227737 2827 ntBASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-3J3QMG8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-3J3QMG8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-3J3QMG8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-3J3QMG8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-3J3QMG8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav13d-3J3QMG8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.96□□□□□ -0.18
Trav13d-3J3QMG8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-3J3QMG8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms