Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4lE9Q2N0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Dancr-204ENSMUST00000132389 2347 ntBASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Gm6257-201ENSMUST00000163864 910 ntBASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cpsf4lE9Q2N0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4lE9Q2N0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4lE9Q2N0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4lE9Q2N0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4lE9Q2N0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4lE9Q2N0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4lE9Q2N0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cpsf4lE9Q2N0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cpsf4lE9Q2N0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Gm12644-201ENSMUST00000119935 606 ntBASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Gm7506-201ENSMUST00000207758 815 ntBASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Gm9172-201ENSMUST00000212092 954 ntBASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cpsf4lE9Q2N0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cpsf4lE9Q2N0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms