Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdhgb8A0A140LI48 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm33142-201ENSMUST00000193913 867 ntBASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm21362-201ENSMUST00000194272 928 ntBASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm5587-201ENSMUST00000206270 674 ntBASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdhgb8A0A140LI48 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pcdhgb8A0A140LI48 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm11355-201ENSMUST00000121120 306 ntBASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhgb8A0A140LI48 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms