Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6d-5A0A075B6B9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6d-5A0A075B6B9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.84□□□□□ -0.35
Trav6d-5A0A075B6B9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms