Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.11■■□□□ 1.45
Smarcb1Q9Z0H3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Smarcb1Q9Z0H3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Smarcb1Q9Z0H3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Smarcb1Q9Z0H3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Smarcb1Q9Z0H3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smarcb1Q9Z0H3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Smarcb1Q9Z0H3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.1■■□□□ 1.45
Smarcb1Q9Z0H3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Smarcb1Q9Z0H3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.1■■□□□ 1.45
Smarcb1Q9Z0H3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Smarcb1Q9Z0H3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.09■■□□□ 1.45
Smarcb1Q9Z0H3 Gm12366-201ENSMUST00000121722 873 ntBASIC24.09■■□□□ 1.45
Smarcb1Q9Z0H3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.09■■□□□ 1.45
Smarcb1Q9Z0H3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.09■■□□□ 1.45
Smarcb1Q9Z0H3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smarcb1Q9Z0H3 Terc-201ENSMUST00000082862 423 ntBASIC24.09■■□□□ 1.45
Smarcb1Q9Z0H3 Gm5786-201ENSMUST00000085368 882 ntBASIC24.09■■□□□ 1.45
Smarcb1Q9Z0H3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Smarcb1Q9Z0H3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
Smarcb1Q9Z0H3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Smarcb1Q9Z0H3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Smarcb1Q9Z0H3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC24.07■■□□□ 1.44
Smarcb1Q9Z0H3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smarcb1Q9Z0H3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Smarcb1Q9Z0H3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Smarcb1Q9Z0H3 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Smarcb1Q9Z0H3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Smarcb1Q9Z0H3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smarcb1Q9Z0H3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Smarcb1Q9Z0H3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Smarcb1Q9Z0H3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Smarcb1Q9Z0H3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.05■■□□□ 1.44
Smarcb1Q9Z0H3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smarcb1Q9Z0H3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smarcb1Q9Z0H3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Smarcb1Q9Z0H3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Smarcb1Q9Z0H3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smarcb1Q9Z0H3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Smarcb1Q9Z0H3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smarcb1Q9Z0H3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC24.02■■□□□ 1.44
Smarcb1Q9Z0H3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.02■■□□□ 1.44
Smarcb1Q9Z0H3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Smarcb1Q9Z0H3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.01■■□□□ 1.43
Smarcb1Q9Z0H3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.01■■□□□ 1.43
Smarcb1Q9Z0H3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Smarcb1Q9Z0H3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Smarcb1Q9Z0H3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Smarcb1Q9Z0H3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Smarcb1Q9Z0H3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smarcb1Q9Z0H3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smarcb1Q9Z0H3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Smarcb1Q9Z0H3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Smarcb1Q9Z0H3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Smarcb1Q9Z0H3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smarcb1Q9Z0H3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Smarcb1Q9Z0H3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Smarcb1Q9Z0H3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Smarcb1Q9Z0H3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smarcb1Q9Z0H3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.96■■□□□ 1.43
Smarcb1Q9Z0H3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smarcb1Q9Z0H3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Smarcb1Q9Z0H3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Smarcb1Q9Z0H3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Smarcb1Q9Z0H3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smarcb1Q9Z0H3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Smarcb1Q9Z0H3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Smarcb1Q9Z0H3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.94■■□□□ 1.42
Smarcb1Q9Z0H3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.94■■□□□ 1.42
Smarcb1Q9Z0H3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Smarcb1Q9Z0H3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Smarcb1Q9Z0H3 Gm14523-201ENSMUST00000117260 558 ntBASIC23.93■■□□□ 1.42
Smarcb1Q9Z0H3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smarcb1Q9Z0H3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Smarcb1Q9Z0H3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
Smarcb1Q9Z0H3 Gm7332-201ENSMUST00000118351 454 ntBASIC23.92■■□□□ 1.42
Smarcb1Q9Z0H3 Gm27502-201ENSMUST00000183495 199 ntBASIC23.92■■□□□ 1.42
Smarcb1Q9Z0H3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.92■■□□□ 1.42
Smarcb1Q9Z0H3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Smarcb1Q9Z0H3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Smarcb1Q9Z0H3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarcb1Q9Z0H3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.9■■□□□ 1.42
Smarcb1Q9Z0H3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Smarcb1Q9Z0H3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Smarcb1Q9Z0H3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Smarcb1Q9Z0H3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smarcb1Q9Z0H3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Smarcb1Q9Z0H3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Smarcb1Q9Z0H3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smarcb1Q9Z0H3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.88■■□□□ 1.41
Smarcb1Q9Z0H3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Smarcb1Q9Z0H3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Smarcb1Q9Z0H3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smarcb1Q9Z0H3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Smarcb1Q9Z0H3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Smarcb1Q9Z0H3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smarcb1Q9Z0H3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Smarcb1Q9Z0H3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.86■■□□□ 1.41
Smarcb1Q9Z0H3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Smarcb1Q9Z0H3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms