Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sec61a2Q9JLR1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sec61a2Q9JLR1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sec61a2Q9JLR1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Sec61a2Q9JLR1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sec61a2Q9JLR1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.5■□□□□ 0.87
Sec61a2Q9JLR1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sec61a2Q9JLR1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Sec61a2Q9JLR1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sec61a2Q9JLR1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sec61a2Q9JLR1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sec61a2Q9JLR1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sec61a2Q9JLR1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sec61a2Q9JLR1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sec61a2Q9JLR1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a2Q9JLR1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a2Q9JLR1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sec61a2Q9JLR1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sec61a2Q9JLR1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sec61a2Q9JLR1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.45■□□□□ 0.86
Sec61a2Q9JLR1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sec61a2Q9JLR1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sec61a2Q9JLR1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sec61a2Q9JLR1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sec61a2Q9JLR1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sec61a2Q9JLR1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sec61a2Q9JLR1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sec61a2Q9JLR1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Sec61a2Q9JLR1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sec61a2Q9JLR1 Gm7432-201ENSMUST00000210343 879 ntBASIC20.42■□□□□ 0.86
Sec61a2Q9JLR1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Sec61a2Q9JLR1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sec61a2Q9JLR1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sec61a2Q9JLR1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sec61a2Q9JLR1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sec61a2Q9JLR1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sec61a2Q9JLR1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.41■□□□□ 0.86
Sec61a2Q9JLR1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
Sec61a2Q9JLR1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sec61a2Q9JLR1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sec61a2Q9JLR1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Sec61a2Q9JLR1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Sec61a2Q9JLR1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sec61a2Q9JLR1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Sec61a2Q9JLR1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sec61a2Q9JLR1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sec61a2Q9JLR1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sec61a2Q9JLR1 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.38■□□□□ 0.85
Sec61a2Q9JLR1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sec61a2Q9JLR1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sec61a2Q9JLR1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sec61a2Q9JLR1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.37■□□□□ 0.85
Sec61a2Q9JLR1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sec61a2Q9JLR1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sec61a2Q9JLR1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sec61a2Q9JLR1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sec61a2Q9JLR1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sec61a2Q9JLR1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sec61a2Q9JLR1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sec61a2Q9JLR1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sec61a2Q9JLR1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sec61a2Q9JLR1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sec61a2Q9JLR1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sec61a2Q9JLR1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sec61a2Q9JLR1 Gm11599-201ENSMUST00000118720 878 ntBASIC20.34■□□□□ 0.85
Sec61a2Q9JLR1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sec61a2Q9JLR1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Sec61a2Q9JLR1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sec61a2Q9JLR1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sec61a2Q9JLR1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sec61a2Q9JLR1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.33■□□□□ 0.85
Sec61a2Q9JLR1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sec61a2Q9JLR1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sec61a2Q9JLR1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sec61a2Q9JLR1 Gm37136-201ENSMUST00000194368 194 ntBASIC20.32■□□□□ 0.84
Sec61a2Q9JLR1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sec61a2Q9JLR1 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.32■□□□□ 0.84
Sec61a2Q9JLR1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sec61a2Q9JLR1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sec61a2Q9JLR1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sec61a2Q9JLR1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sec61a2Q9JLR1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sec61a2Q9JLR1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sec61a2Q9JLR1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sec61a2Q9JLR1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.3■□□□□ 0.84
Sec61a2Q9JLR1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sec61a2Q9JLR1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sec61a2Q9JLR1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.29■□□□□ 0.84
Sec61a2Q9JLR1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sec61a2Q9JLR1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sec61a2Q9JLR1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms