Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NckipsdQ9ESJ4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NckipsdQ9ESJ4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NckipsdQ9ESJ4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NckipsdQ9ESJ4 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.16■■□□□ 1.46
NckipsdQ9ESJ4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NckipsdQ9ESJ4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NckipsdQ9ESJ4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NckipsdQ9ESJ4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
NckipsdQ9ESJ4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NckipsdQ9ESJ4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
NckipsdQ9ESJ4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NckipsdQ9ESJ4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NckipsdQ9ESJ4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
NckipsdQ9ESJ4 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NckipsdQ9ESJ4 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.12■■□□□ 1.45
NckipsdQ9ESJ4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.11■■□□□ 1.45
NckipsdQ9ESJ4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.11■■□□□ 1.45
NckipsdQ9ESJ4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NckipsdQ9ESJ4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NckipsdQ9ESJ4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NckipsdQ9ESJ4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NckipsdQ9ESJ4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.09■■□□□ 1.45
NckipsdQ9ESJ4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.09■■□□□ 1.45
NckipsdQ9ESJ4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NckipsdQ9ESJ4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NckipsdQ9ESJ4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NckipsdQ9ESJ4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.08■■□□□ 1.45
NckipsdQ9ESJ4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NckipsdQ9ESJ4 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NckipsdQ9ESJ4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
NckipsdQ9ESJ4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
NckipsdQ9ESJ4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
NckipsdQ9ESJ4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.07■■□□□ 1.44
NckipsdQ9ESJ4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
NckipsdQ9ESJ4 Terc-201ENSMUST00000082862 423 ntBASIC24.07■■□□□ 1.44
NckipsdQ9ESJ4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NckipsdQ9ESJ4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
NckipsdQ9ESJ4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
NckipsdQ9ESJ4 Gm7332-201ENSMUST00000118351 454 ntBASIC24.06■■□□□ 1.44
NckipsdQ9ESJ4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NckipsdQ9ESJ4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
NckipsdQ9ESJ4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.06■■□□□ 1.44
NckipsdQ9ESJ4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
NckipsdQ9ESJ4 Gm14523-201ENSMUST00000117260 558 ntBASIC24.05■■□□□ 1.44
NckipsdQ9ESJ4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
NckipsdQ9ESJ4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
NckipsdQ9ESJ4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NckipsdQ9ESJ4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.04■■□□□ 1.44
NckipsdQ9ESJ4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
NckipsdQ9ESJ4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
NckipsdQ9ESJ4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.04■■□□□ 1.44
NckipsdQ9ESJ4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
NckipsdQ9ESJ4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
NckipsdQ9ESJ4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.03■■□□□ 1.44
NckipsdQ9ESJ4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NckipsdQ9ESJ4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
NckipsdQ9ESJ4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
NckipsdQ9ESJ4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
NckipsdQ9ESJ4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
NckipsdQ9ESJ4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24■■□□□ 1.43
NckipsdQ9ESJ4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NckipsdQ9ESJ4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
NckipsdQ9ESJ4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
NckipsdQ9ESJ4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.99■■□□□ 1.43
NckipsdQ9ESJ4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
NckipsdQ9ESJ4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
NckipsdQ9ESJ4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
NckipsdQ9ESJ4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.97■■□□□ 1.43
NckipsdQ9ESJ4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
NckipsdQ9ESJ4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NckipsdQ9ESJ4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NckipsdQ9ESJ4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NckipsdQ9ESJ4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.96■■□□□ 1.43
NckipsdQ9ESJ4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
NckipsdQ9ESJ4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
NckipsdQ9ESJ4 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.95■■□□□ 1.42
NckipsdQ9ESJ4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.94■■□□□ 1.42
NckipsdQ9ESJ4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
NckipsdQ9ESJ4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NckipsdQ9ESJ4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NckipsdQ9ESJ4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NckipsdQ9ESJ4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms