Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ube4bQ9ES00 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.93■■□□□ 1.1
Ube4bQ9ES00 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ube4bQ9ES00 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ube4bQ9ES00 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ube4bQ9ES00 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ube4bQ9ES00 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ube4bQ9ES00 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ube4bQ9ES00 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ube4bQ9ES00 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ube4bQ9ES00 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ube4bQ9ES00 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ube4bQ9ES00 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.89■■□□□ 1.09
Ube4bQ9ES00 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ube4bQ9ES00 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ube4bQ9ES00 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ube4bQ9ES00 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ube4bQ9ES00 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Ube4bQ9ES00 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ube4bQ9ES00 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.88■■□□□ 1.09
Ube4bQ9ES00 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4bQ9ES00 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ube4bQ9ES00 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4bQ9ES00 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ube4bQ9ES00 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
Ube4bQ9ES00 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ube4bQ9ES00 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ube4bQ9ES00 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.86■■□□□ 1.09
Ube4bQ9ES00 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ube4bQ9ES00 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4bQ9ES00 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4bQ9ES00 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4bQ9ES00 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4bQ9ES00 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ube4bQ9ES00 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4bQ9ES00 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4bQ9ES00 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ube4bQ9ES00 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4bQ9ES00 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.84■■□□□ 1.09
Ube4bQ9ES00 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4bQ9ES00 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Ube4bQ9ES00 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4bQ9ES00 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.84■■□□□ 1.09
Ube4bQ9ES00 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ube4bQ9ES00 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ube4bQ9ES00 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ube4bQ9ES00 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ube4bQ9ES00 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.83■■□□□ 1.09
Ube4bQ9ES00 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ube4bQ9ES00 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ube4bQ9ES00 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4bQ9ES00 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4bQ9ES00 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ube4bQ9ES00 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4bQ9ES00 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.81■■□□□ 1.08
Ube4bQ9ES00 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4bQ9ES00 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ube4bQ9ES00 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4bQ9ES00 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4bQ9ES00 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4bQ9ES00 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ube4bQ9ES00 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4bQ9ES00 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ube4bQ9ES00 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4bQ9ES00 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4bQ9ES00 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4bQ9ES00 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ube4bQ9ES00 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4bQ9ES00 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.78■■□□□ 1.08
Ube4bQ9ES00 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ube4bQ9ES00 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4bQ9ES00 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4bQ9ES00 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4bQ9ES00 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4bQ9ES00 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ube4bQ9ES00 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ube4bQ9ES00 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4bQ9ES00 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4bQ9ES00 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Ube4bQ9ES00 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4bQ9ES00 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4bQ9ES00 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4bQ9ES00 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4bQ9ES00 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ube4bQ9ES00 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ube4bQ9ES00 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4bQ9ES00 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ube4bQ9ES00 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4bQ9ES00 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4bQ9ES00 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ube4bQ9ES00 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ube4bQ9ES00 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms