Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Upk1aQ9D132 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Upk1aQ9D132 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.98■■□□□ 1.11
Upk1aQ9D132 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Upk1aQ9D132 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Upk1aQ9D132 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Upk1aQ9D132 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Upk1aQ9D132 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Upk1aQ9D132 Gm9397-201ENSMUST00000200125 605 ntBASIC21.97■■□□□ 1.11
Upk1aQ9D132 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.97■■□□□ 1.11
Upk1aQ9D132 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.97■■□□□ 1.11
Upk1aQ9D132 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Upk1aQ9D132 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
Upk1aQ9D132 Gm30023-201ENSMUST00000197970 889 ntBASIC21.96■■□□□ 1.11
Upk1aQ9D132 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Upk1aQ9D132 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upk1aQ9D132 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Upk1aQ9D132 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.95■■□□□ 1.1
Upk1aQ9D132 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Upk1aQ9D132 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Upk1aQ9D132 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.94■■□□□ 1.1
Upk1aQ9D132 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Upk1aQ9D132 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Upk1aQ9D132 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Upk1aQ9D132 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Upk1aQ9D132 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Upk1aQ9D132 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.92■■□□□ 1.1
Upk1aQ9D132 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Upk1aQ9D132 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
Upk1aQ9D132 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Upk1aQ9D132 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Upk1aQ9D132 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Upk1aQ9D132 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Upk1aQ9D132 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Upk1aQ9D132 Gm24970-201ENSMUST00000175582 82 ntBASIC21.91■■□□□ 1.1
Upk1aQ9D132 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.9■■□□□ 1.1
Upk1aQ9D132 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Upk1aQ9D132 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Upk1aQ9D132 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Upk1aQ9D132 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Upk1aQ9D132 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.89■■□□□ 1.09
Upk1aQ9D132 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Upk1aQ9D132 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Upk1aQ9D132 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.88■■□□□ 1.09
Upk1aQ9D132 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Upk1aQ9D132 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Upk1aQ9D132 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Upk1aQ9D132 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Upk1aQ9D132 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Upk1aQ9D132 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.87■■□□□ 1.09
Upk1aQ9D132 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Upk1aQ9D132 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
Upk1aQ9D132 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Upk1aQ9D132 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Upk1aQ9D132 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Upk1aQ9D132 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Upk1aQ9D132 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Upk1aQ9D132 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.85■■□□□ 1.09
Upk1aQ9D132 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Upk1aQ9D132 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Upk1aQ9D132 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Upk1aQ9D132 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Upk1aQ9D132 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Upk1aQ9D132 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Upk1aQ9D132 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.84■■□□□ 1.09
Upk1aQ9D132 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Upk1aQ9D132 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Upk1aQ9D132 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upk1aQ9D132 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Upk1aQ9D132 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upk1aQ9D132 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upk1aQ9D132 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upk1aQ9D132 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upk1aQ9D132 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Upk1aQ9D132 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.81■■□□□ 1.08
Upk1aQ9D132 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Upk1aQ9D132 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Upk1aQ9D132 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Upk1aQ9D132 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Upk1aQ9D132 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upk1aQ9D132 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Upk1aQ9D132 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upk1aQ9D132 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upk1aQ9D132 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upk1aQ9D132 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.79■■□□□ 1.08
Upk1aQ9D132 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upk1aQ9D132 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Upk1aQ9D132 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Upk1aQ9D132 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Upk1aQ9D132 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Upk1aQ9D132 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Upk1aQ9D132 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.78■■□□□ 1.08
Upk1aQ9D132 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Upk1aQ9D132 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Upk1aQ9D132 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Upk1aQ9D132 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Upk1aQ9D132 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Upk1aQ9D132 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Upk1aQ9D132 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Upk1aQ9D132 Gm45855-201ENSMUST00000212546 880 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms