Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Trim13Q9CYB0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.11■□□□□ 0.97
Trim13Q9CYB0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim13Q9CYB0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim13Q9CYB0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim13Q9CYB0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.1■□□□□ 0.97
Trim13Q9CYB0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim13Q9CYB0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim13Q9CYB0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim13Q9CYB0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim13Q9CYB0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.08■□□□□ 0.96
Trim13Q9CYB0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim13Q9CYB0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim13Q9CYB0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim13Q9CYB0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim13Q9CYB0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim13Q9CYB0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim13Q9CYB0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.06■□□□□ 0.96
Trim13Q9CYB0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim13Q9CYB0 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.06■□□□□ 0.96
Trim13Q9CYB0 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.06■□□□□ 0.96
Trim13Q9CYB0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim13Q9CYB0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Trim13Q9CYB0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.04■□□□□ 0.96
Trim13Q9CYB0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim13Q9CYB0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim13Q9CYB0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trim13Q9CYB0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim13Q9CYB0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim13Q9CYB0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim13Q9CYB0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Trim13Q9CYB0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim13Q9CYB0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trim13Q9CYB0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Trim13Q9CYB0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.02■□□□□ 0.96
Trim13Q9CYB0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim13Q9CYB0 Particl-201ENSMUST00000205370 1560 ntBASIC21.02■□□□□ 0.95
Trim13Q9CYB0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Trim13Q9CYB0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim13Q9CYB0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trim13Q9CYB0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trim13Q9CYB0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Trim13Q9CYB0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trim13Q9CYB0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim13Q9CYB0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Trim13Q9CYB0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trim13Q9CYB0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trim13Q9CYB0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim13Q9CYB0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim13Q9CYB0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim13Q9CYB0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim13Q9CYB0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.99■□□□□ 0.95
Trim13Q9CYB0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim13Q9CYB0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trim13Q9CYB0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim13Q9CYB0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trim13Q9CYB0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trim13Q9CYB0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim13Q9CYB0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim13Q9CYB0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trim13Q9CYB0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.97■□□□□ 0.95
Trim13Q9CYB0 Gm30023-201ENSMUST00000197970 889 ntBASIC20.97■□□□□ 0.95
Trim13Q9CYB0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.97■□□□□ 0.95
Trim13Q9CYB0 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.97■□□□□ 0.95
Trim13Q9CYB0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trim13Q9CYB0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim13Q9CYB0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim13Q9CYB0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim13Q9CYB0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trim13Q9CYB0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trim13Q9CYB0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trim13Q9CYB0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Trim13Q9CYB0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trim13Q9CYB0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim13Q9CYB0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim13Q9CYB0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Trim13Q9CYB0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim13Q9CYB0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim13Q9CYB0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Trim13Q9CYB0 Gm24970-201ENSMUST00000175582 82 ntBASIC20.92■□□□□ 0.94
Trim13Q9CYB0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim13Q9CYB0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim13Q9CYB0 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim13Q9CYB0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim13Q9CYB0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.91■□□□□ 0.94
Trim13Q9CYB0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim13Q9CYB0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim13Q9CYB0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim13Q9CYB0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim13Q9CYB0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim13Q9CYB0 Gm9397-201ENSMUST00000200125 605 ntBASIC20.9■□□□□ 0.94
Trim13Q9CYB0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim13Q9CYB0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Trim13Q9CYB0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Trim13Q9CYB0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim13Q9CYB0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim13Q9CYB0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim13Q9CYB0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim13Q9CYB0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim13Q9CYB0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms