Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rnaseh2aQ9CWY8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rnaseh2aQ9CWY8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
Rnaseh2aQ9CWY8 Gm43566-201ENSMUST00000196851 808 ntBASIC28.63■■■□□ 2.17
Rnaseh2aQ9CWY8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rnaseh2aQ9CWY8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rnaseh2aQ9CWY8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC28.62■■■□□ 2.17
Rnaseh2aQ9CWY8 Serp2-204ENSMUST00000228055 705 ntBASIC28.61■■■□□ 2.17
Rnaseh2aQ9CWY8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.61■■■□□ 2.17
Rnaseh2aQ9CWY8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.6■■■□□ 2.17
Rnaseh2aQ9CWY8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rnaseh2aQ9CWY8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.59■■■□□ 2.17
Rnaseh2aQ9CWY8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.59■■■□□ 2.17
Rnaseh2aQ9CWY8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rnaseh2aQ9CWY8 Gm42501-201ENSMUST00000200220 1026 ntBASIC28.59■■■□□ 2.17
Rnaseh2aQ9CWY8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rnaseh2aQ9CWY8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rnaseh2aQ9CWY8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Rnaseh2aQ9CWY8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rnaseh2aQ9CWY8 Gm9959-201ENSMUST00000068277 390 ntBASIC28.58■■■□□ 2.17
Rnaseh2aQ9CWY8 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.57■■■□□ 2.16
Rnaseh2aQ9CWY8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rnaseh2aQ9CWY8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Rnaseh2aQ9CWY8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rnaseh2aQ9CWY8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC28.55■■■□□ 2.16
Rnaseh2aQ9CWY8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Rnaseh2aQ9CWY8 Gm45444-201ENSMUST00000211394 898 ntBASIC28.55■■■□□ 2.16
Rnaseh2aQ9CWY8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Rnaseh2aQ9CWY8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Rnaseh2aQ9CWY8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.53■■■□□ 2.16
Rnaseh2aQ9CWY8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
Rnaseh2aQ9CWY8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rnaseh2aQ9CWY8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.16
Rnaseh2aQ9CWY8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC28.51■■■□□ 2.15
Rnaseh2aQ9CWY8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC28.51■■■□□ 2.15
Rnaseh2aQ9CWY8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rnaseh2aQ9CWY8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Rnaseh2aQ9CWY8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Rnaseh2aQ9CWY8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC28.5■■■□□ 2.15
Rnaseh2aQ9CWY8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rnaseh2aQ9CWY8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Rnaseh2aQ9CWY8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rnaseh2aQ9CWY8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rnaseh2aQ9CWY8 Terc-201ENSMUST00000082862 423 ntBASIC28.48■■■□□ 2.15
Rnaseh2aQ9CWY8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rnaseh2aQ9CWY8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Rnaseh2aQ9CWY8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Rnaseh2aQ9CWY8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
Rnaseh2aQ9CWY8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Rnaseh2aQ9CWY8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC28.46■■■□□ 2.15
Rnaseh2aQ9CWY8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rnaseh2aQ9CWY8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Rnaseh2aQ9CWY8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rnaseh2aQ9CWY8 Gm5297-201ENSMUST00000198555 1171 ntBASIC28.45■■■□□ 2.14
Rnaseh2aQ9CWY8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rnaseh2aQ9CWY8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC28.44■■■□□ 2.14
Rnaseh2aQ9CWY8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rnaseh2aQ9CWY8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Rnaseh2aQ9CWY8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rnaseh2aQ9CWY8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.43■■■□□ 2.14
Rnaseh2aQ9CWY8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rnaseh2aQ9CWY8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rnaseh2aQ9CWY8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rnaseh2aQ9CWY8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rnaseh2aQ9CWY8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.4■■■□□ 2.14
Rnaseh2aQ9CWY8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rnaseh2aQ9CWY8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC28.38■■■□□ 2.13
Rnaseh2aQ9CWY8 Gm18755-201ENSMUST00000218030 1099 ntBASIC28.38■■■□□ 2.13
Rnaseh2aQ9CWY8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Rnaseh2aQ9CWY8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rnaseh2aQ9CWY8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rnaseh2aQ9CWY8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Rnaseh2aQ9CWY8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rnaseh2aQ9CWY8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.37■■■□□ 2.13
Rnaseh2aQ9CWY8 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.36■■■□□ 2.13
Rnaseh2aQ9CWY8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Rnaseh2aQ9CWY8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rnaseh2aQ9CWY8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.35■■■□□ 2.13
Rnaseh2aQ9CWY8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rnaseh2aQ9CWY8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rnaseh2aQ9CWY8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rnaseh2aQ9CWY8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rnaseh2aQ9CWY8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC28.33■■■□□ 2.13
Rnaseh2aQ9CWY8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rnaseh2aQ9CWY8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rnaseh2aQ9CWY8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.32■■■□□ 2.12
Rnaseh2aQ9CWY8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.31■■■□□ 2.12
Rnaseh2aQ9CWY8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rnaseh2aQ9CWY8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Rnaseh2aQ9CWY8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rnaseh2aQ9CWY8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rnaseh2aQ9CWY8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rnaseh2aQ9CWY8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rnaseh2aQ9CWY8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rnaseh2aQ9CWY8 Gm44428-201ENSMUST00000204474 874 ntBASIC28.3■■■□□ 2.12
Rnaseh2aQ9CWY8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rnaseh2aQ9CWY8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rnaseh2aQ9CWY8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rnaseh2aQ9CWY8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Rnaseh2aQ9CWY8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms