Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Pfdn1Q9CWM4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pfdn1Q9CWM4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pfdn1Q9CWM4 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pfdn1Q9CWM4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pfdn1Q9CWM4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pfdn1Q9CWM4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pfdn1Q9CWM4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pfdn1Q9CWM4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pfdn1Q9CWM4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pfdn1Q9CWM4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pfdn1Q9CWM4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Pfdn1Q9CWM4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pfdn1Q9CWM4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pfdn1Q9CWM4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pfdn1Q9CWM4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pfdn1Q9CWM4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pfdn1Q9CWM4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pfdn1Q9CWM4 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pfdn1Q9CWM4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Pfdn1Q9CWM4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pfdn1Q9CWM4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pfdn1Q9CWM4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pfdn1Q9CWM4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pfdn1Q9CWM4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pfdn1Q9CWM4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pfdn1Q9CWM4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.17■□□□□ 0.82
Pfdn1Q9CWM4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Pfdn1Q9CWM4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pfdn1Q9CWM4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pfdn1Q9CWM4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Pfdn1Q9CWM4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pfdn1Q9CWM4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pfdn1Q9CWM4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.16■□□□□ 0.82
Pfdn1Q9CWM4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Pfdn1Q9CWM4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pfdn1Q9CWM4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pfdn1Q9CWM4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pfdn1Q9CWM4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pfdn1Q9CWM4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pfdn1Q9CWM4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pfdn1Q9CWM4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.14■□□□□ 0.81
Pfdn1Q9CWM4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pfdn1Q9CWM4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Pfdn1Q9CWM4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pfdn1Q9CWM4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pfdn1Q9CWM4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pfdn1Q9CWM4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Pfdn1Q9CWM4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pfdn1Q9CWM4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn1Q9CWM4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Pfdn1Q9CWM4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn1Q9CWM4 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn1Q9CWM4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn1Q9CWM4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pfdn1Q9CWM4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pfdn1Q9CWM4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pfdn1Q9CWM4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pfdn1Q9CWM4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn1Q9CWM4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn1Q9CWM4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn1Q9CWM4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn1Q9CWM4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn1Q9CWM4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Pfdn1Q9CWM4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pfdn1Q9CWM4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pfdn1Q9CWM4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.08■□□□□ 0.81
Pfdn1Q9CWM4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pfdn1Q9CWM4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pfdn1Q9CWM4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn1Q9CWM4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn1Q9CWM4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn1Q9CWM4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pfdn1Q9CWM4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn1Q9CWM4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Pfdn1Q9CWM4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn1Q9CWM4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.06■□□□□ 0.8
Pfdn1Q9CWM4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pfdn1Q9CWM4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pfdn1Q9CWM4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn1Q9CWM4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.05■□□□□ 0.8
Pfdn1Q9CWM4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pfdn1Q9CWM4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Pfdn1Q9CWM4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pfdn1Q9CWM4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn1Q9CWM4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn1Q9CWM4 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn1Q9CWM4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn1Q9CWM4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn1Q9CWM4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pfdn1Q9CWM4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn1Q9CWM4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.03■□□□□ 0.8
Pfdn1Q9CWM4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pfdn1Q9CWM4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.02■□□□□ 0.8
Pfdn1Q9CWM4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn1Q9CWM4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pfdn1Q9CWM4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pfdn1Q9CWM4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn1Q9CWM4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn1Q9CWM4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms