Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smurf1Q9CUN6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Smurf1Q9CUN6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smurf1Q9CUN6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smurf1Q9CUN6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smurf1Q9CUN6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smurf1Q9CUN6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smurf1Q9CUN6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smurf1Q9CUN6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smurf1Q9CUN6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smurf1Q9CUN6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Smurf1Q9CUN6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smurf1Q9CUN6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Smurf1Q9CUN6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smurf1Q9CUN6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smurf1Q9CUN6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smurf1Q9CUN6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smurf1Q9CUN6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smurf1Q9CUN6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smurf1Q9CUN6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Smurf1Q9CUN6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smurf1Q9CUN6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smurf1Q9CUN6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smurf1Q9CUN6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smurf1Q9CUN6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Smurf1Q9CUN6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smurf1Q9CUN6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smurf1Q9CUN6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Smurf1Q9CUN6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smurf1Q9CUN6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Smurf1Q9CUN6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smurf1Q9CUN6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smurf1Q9CUN6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smurf1Q9CUN6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smurf1Q9CUN6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.74■□□□□ 0.91
Smurf1Q9CUN6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.74■□□□□ 0.91
Smurf1Q9CUN6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smurf1Q9CUN6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smurf1Q9CUN6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.73■□□□□ 0.91
Smurf1Q9CUN6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Smurf1Q9CUN6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smurf1Q9CUN6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smurf1Q9CUN6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smurf1Q9CUN6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smurf1Q9CUN6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smurf1Q9CUN6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smurf1Q9CUN6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smurf1Q9CUN6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smurf1Q9CUN6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smurf1Q9CUN6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smurf1Q9CUN6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smurf1Q9CUN6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smurf1Q9CUN6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smurf1Q9CUN6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smurf1Q9CUN6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smurf1Q9CUN6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smurf1Q9CUN6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.68■□□□□ 0.9
Smurf1Q9CUN6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smurf1Q9CUN6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Smurf1Q9CUN6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smurf1Q9CUN6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smurf1Q9CUN6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smurf1Q9CUN6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smurf1Q9CUN6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Smurf1Q9CUN6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smurf1Q9CUN6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smurf1Q9CUN6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smurf1Q9CUN6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Smurf1Q9CUN6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Smurf1Q9CUN6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smurf1Q9CUN6 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smurf1Q9CUN6 Gm45855-201ENSMUST00000212546 880 ntBASIC20.65■□□□□ 0.9
Smurf1Q9CUN6 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.64■□□□□ 0.9
Smurf1Q9CUN6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smurf1Q9CUN6 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.64■□□□□ 0.9
Smurf1Q9CUN6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smurf1Q9CUN6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smurf1Q9CUN6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smurf1Q9CUN6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smurf1Q9CUN6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smurf1Q9CUN6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smurf1Q9CUN6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smurf1Q9CUN6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smurf1Q9CUN6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smurf1Q9CUN6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smurf1Q9CUN6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smurf1Q9CUN6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smurf1Q9CUN6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.59■□□□□ 0.89
Smurf1Q9CUN6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smurf1Q9CUN6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Smurf1Q9CUN6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Smurf1Q9CUN6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.57■□□□□ 0.88
Smurf1Q9CUN6 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.57■□□□□ 0.88
Smurf1Q9CUN6 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.57■□□□□ 0.88
Smurf1Q9CUN6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.57■□□□□ 0.88
Smurf1Q9CUN6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smurf1Q9CUN6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smurf1Q9CUN6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smurf1Q9CUN6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smurf1Q9CUN6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms