Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC12.36□□□□□ -0.43
Sec61bQ9CQS8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sec61bQ9CQS8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Gm9812-201ENSMUST00000061934 968 ntBASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Zxda-201ENSMUST00000117281 2621 ntBASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sec61bQ9CQS8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sec61bQ9CQS8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 AC153911.1-201ENSMUST00000220378 758 ntBASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC12.32□□□□□ -0.44
Sec61bQ9CQS8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61bQ9CQS8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61bQ9CQS8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61bQ9CQS8 Gm9910-201ENSMUST00000195385 1550 ntBASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC12.3□□□□□ -0.44
Sec61bQ9CQS8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61bQ9CQS8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61bQ9CQS8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61bQ9CQS8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61bQ9CQS8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61bQ9CQS8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61bQ9CQS8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sec61bQ9CQS8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Gm14523-201ENSMUST00000117260 558 ntBASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Gm27502-201ENSMUST00000183495 199 ntBASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sec61bQ9CQS8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sec61bQ9CQS8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC12.25□□□□□ -0.45
Sec61bQ9CQS8 Terc-201ENSMUST00000082862 423 ntBASIC12.25□□□□□ -0.45
Sec61bQ9CQS8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sec61bQ9CQS8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sec61bQ9CQS8 Gm5067-201ENSMUST00000170449 1009 ntBASIC12.24□□□□□ -0.45
Sec61bQ9CQS8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sec61bQ9CQS8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Sec61bQ9CQS8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Gm37847-201ENSMUST00000192163 1497 ntBASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Gm31748-201ENSMUST00000194938 1497 ntBASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sec61bQ9CQS8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms