Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf138Q9CQE0 Gm11687-201ENSMUST00000118911 886 ntBASIC21.92■■□□□ 1.1
Rnf138Q9CQE0 Gm16437-201ENSMUST00000025669 507 ntBASIC21.92■■□□□ 1.1
Rnf138Q9CQE0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf138Q9CQE0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Rnf138Q9CQE0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rnf138Q9CQE0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Rnf138Q9CQE0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.91■■□□□ 1.1
Rnf138Q9CQE0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf138Q9CQE0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf138Q9CQE0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf138Q9CQE0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf138Q9CQE0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf138Q9CQE0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
Rnf138Q9CQE0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf138Q9CQE0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf138Q9CQE0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rnf138Q9CQE0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf138Q9CQE0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf138Q9CQE0 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.87■■□□□ 1.09
Rnf138Q9CQE0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf138Q9CQE0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf138Q9CQE0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf138Q9CQE0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf138Q9CQE0 Cap2-205ENSMUST00000225824 1634 ntBASIC21.86■■□□□ 1.09
Rnf138Q9CQE0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf138Q9CQE0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf138Q9CQE0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.85■■□□□ 1.09
Rnf138Q9CQE0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf138Q9CQE0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf138Q9CQE0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf138Q9CQE0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf138Q9CQE0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.85■■□□□ 1.09
Rnf138Q9CQE0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf138Q9CQE0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf138Q9CQE0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.84■■□□□ 1.09
Rnf138Q9CQE0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.84■■□□□ 1.09
Rnf138Q9CQE0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Rnf138Q9CQE0 Terc-201ENSMUST00000082862 423 ntBASIC21.84■■□□□ 1.09
Rnf138Q9CQE0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf138Q9CQE0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf138Q9CQE0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf138Q9CQE0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf138Q9CQE0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf138Q9CQE0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf138Q9CQE0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf138Q9CQE0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.81■■□□□ 1.08
Rnf138Q9CQE0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf138Q9CQE0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.8■■□□□ 1.08
Rnf138Q9CQE0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf138Q9CQE0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Rnf138Q9CQE0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf138Q9CQE0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf138Q9CQE0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf138Q9CQE0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.78■■□□□ 1.08
Rnf138Q9CQE0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.78■■□□□ 1.08
Rnf138Q9CQE0 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.78■■□□□ 1.08
Rnf138Q9CQE0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf138Q9CQE0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Gm12366-201ENSMUST00000121722 873 ntBASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Gm5786-201ENSMUST00000085368 882 ntBASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf138Q9CQE0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rnf138Q9CQE0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf138Q9CQE0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf138Q9CQE0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.76■■□□□ 1.07
Rnf138Q9CQE0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf138Q9CQE0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf138Q9CQE0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf138Q9CQE0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf138Q9CQE0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rnf138Q9CQE0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf138Q9CQE0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf138Q9CQE0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf138Q9CQE0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf138Q9CQE0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Rnf138Q9CQE0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.73■■□□□ 1.07
Rnf138Q9CQE0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf138Q9CQE0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf138Q9CQE0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf138Q9CQE0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf138Q9CQE0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf138Q9CQE0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf138Q9CQE0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf138Q9CQE0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf138Q9CQE0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf138Q9CQE0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.72■■□□□ 1.07
Rnf138Q9CQE0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf138Q9CQE0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rnf138Q9CQE0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf138Q9CQE0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf138Q9CQE0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms