Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1Q9CQ70 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1Q9CQ70 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.74■□□□□ 0.59
H2afb1Q9CQ70 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
H2afb1Q9CQ70 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1Q9CQ70 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1Q9CQ70 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H2afb1Q9CQ70 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
H2afb1Q9CQ70 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1Q9CQ70 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1Q9CQ70 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1Q9CQ70 Gm37136-201ENSMUST00000194368 194 ntBASIC18.73■□□□□ 0.59
H2afb1Q9CQ70 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.73■□□□□ 0.59
H2afb1Q9CQ70 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1Q9CQ70 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
H2afb1Q9CQ70 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb1Q9CQ70 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb1Q9CQ70 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb1Q9CQ70 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb1Q9CQ70 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H2afb1Q9CQ70 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
H2afb1Q9CQ70 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
H2afb1Q9CQ70 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.71■□□□□ 0.59
H2afb1Q9CQ70 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
H2afb1Q9CQ70 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1Q9CQ70 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.71■□□□□ 0.59
H2afb1Q9CQ70 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H2afb1Q9CQ70 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
H2afb1Q9CQ70 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb1Q9CQ70 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb1Q9CQ70 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.7■□□□□ 0.58
H2afb1Q9CQ70 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb1Q9CQ70 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.7■□□□□ 0.58
H2afb1Q9CQ70 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.7■□□□□ 0.58
H2afb1Q9CQ70 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H2afb1Q9CQ70 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb1Q9CQ70 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb1Q9CQ70 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb1Q9CQ70 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H2afb1Q9CQ70 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1Q9CQ70 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1Q9CQ70 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
H2afb1Q9CQ70 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
H2afb1Q9CQ70 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H2afb1Q9CQ70 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1Q9CQ70 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1Q9CQ70 Gm6821-201ENSMUST00000107540 542 ntBASIC18.67■□□□□ 0.58
H2afb1Q9CQ70 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
H2afb1Q9CQ70 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1Q9CQ70 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H2afb1Q9CQ70 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.66■□□□□ 0.58
H2afb1Q9CQ70 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb1Q9CQ70 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb1Q9CQ70 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2afb1Q9CQ70 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.65■□□□□ 0.58
H2afb1Q9CQ70 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
H2afb1Q9CQ70 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2afb1Q9CQ70 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
H2afb1Q9CQ70 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1Q9CQ70 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1Q9CQ70 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1Q9CQ70 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1Q9CQ70 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2afb1Q9CQ70 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.64■□□□□ 0.57
H2afb1Q9CQ70 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1Q9CQ70 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
H2afb1Q9CQ70 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.63■□□□□ 0.57
H2afb1Q9CQ70 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1Q9CQ70 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.62■□□□□ 0.57
H2afb1Q9CQ70 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
H2afb1Q9CQ70 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
H2afb1Q9CQ70 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
H2afb1Q9CQ70 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1Q9CQ70 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1Q9CQ70 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
H2afb1Q9CQ70 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb1Q9CQ70 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb1Q9CQ70 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2afb1Q9CQ70 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
H2afb1Q9CQ70 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1Q9CQ70 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2afb1Q9CQ70 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
H2afb1Q9CQ70 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1Q9CQ70 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1Q9CQ70 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
H2afb1Q9CQ70 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
H2afb1Q9CQ70 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1Q9CQ70 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1Q9CQ70 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.57■□□□□ 0.56
H2afb1Q9CQ70 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2afb1Q9CQ70 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1Q9CQ70 Gm8503-201ENSMUST00000118131 455 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms