Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cstf1Q99LC2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cstf1Q99LC2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Cstf1Q99LC2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.12■■□□□ 1.29
Cstf1Q99LC2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cstf1Q99LC2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cstf1Q99LC2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Cstf1Q99LC2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cstf1Q99LC2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cstf1Q99LC2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cstf1Q99LC2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cstf1Q99LC2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.1■■□□□ 1.29
Cstf1Q99LC2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.1■■□□□ 1.29
Cstf1Q99LC2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cstf1Q99LC2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Cstf1Q99LC2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.09■■□□□ 1.29
Cstf1Q99LC2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.09■■□□□ 1.29
Cstf1Q99LC2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC23.09■■□□□ 1.29
Cstf1Q99LC2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Cstf1Q99LC2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cstf1Q99LC2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cstf1Q99LC2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.08■■□□□ 1.28
Cstf1Q99LC2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Cstf1Q99LC2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cstf1Q99LC2 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.07■■□□□ 1.28
Cstf1Q99LC2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cstf1Q99LC2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cstf1Q99LC2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cstf1Q99LC2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.06■■□□□ 1.28
Cstf1Q99LC2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cstf1Q99LC2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cstf1Q99LC2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cstf1Q99LC2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cstf1Q99LC2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Cstf1Q99LC2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.06■■□□□ 1.28
Cstf1Q99LC2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cstf1Q99LC2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.04■■□□□ 1.28
Cstf1Q99LC2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cstf1Q99LC2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cstf1Q99LC2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Cstf1Q99LC2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cstf1Q99LC2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cstf1Q99LC2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.01■■□□□ 1.27
Cstf1Q99LC2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cstf1Q99LC2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cstf1Q99LC2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.99■■□□□ 1.27
Cstf1Q99LC2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.99■■□□□ 1.27
Cstf1Q99LC2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cstf1Q99LC2 Gm15820-201ENSMUST00000201566 728 ntBASIC22.99■■□□□ 1.27
Cstf1Q99LC2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Cstf1Q99LC2 Rps24-207ENSMUST00000224568 714 ntBASIC22.99■■□□□ 1.27
Cstf1Q99LC2 Terc-201ENSMUST00000082862 423 ntBASIC22.99■■□□□ 1.27
Cstf1Q99LC2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cstf1Q99LC2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Cstf1Q99LC2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cstf1Q99LC2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cstf1Q99LC2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cstf1Q99LC2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Cstf1Q99LC2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cstf1Q99LC2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.96■■□□□ 1.27
Cstf1Q99LC2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Cstf1Q99LC2 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.96■■□□□ 1.27
Cstf1Q99LC2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cstf1Q99LC2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Cstf1Q99LC2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Cstf1Q99LC2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cstf1Q99LC2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cstf1Q99LC2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cstf1Q99LC2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Cstf1Q99LC2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cstf1Q99LC2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.95■■□□□ 1.26
Cstf1Q99LC2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cstf1Q99LC2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cstf1Q99LC2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cstf1Q99LC2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Cstf1Q99LC2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.92■■□□□ 1.26
Cstf1Q99LC2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cstf1Q99LC2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cstf1Q99LC2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Cstf1Q99LC2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Cstf1Q99LC2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.9■■□□□ 1.26
Cstf1Q99LC2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.9■■□□□ 1.26
Cstf1Q99LC2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cstf1Q99LC2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cstf1Q99LC2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Cstf1Q99LC2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.89■■□□□ 1.25
Cstf1Q99LC2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cstf1Q99LC2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cstf1Q99LC2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cstf1Q99LC2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cstf1Q99LC2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Cstf1Q99LC2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Cstf1Q99LC2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cstf1Q99LC2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cstf1Q99LC2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.86■■□□□ 1.25
Cstf1Q99LC2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.86■■□□□ 1.25
Cstf1Q99LC2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cstf1Q99LC2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cstf1Q99LC2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cstf1Q99LC2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms