Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.49■■□□□ 1.99
Col20a1Q923P0 Gm12366-201ENSMUST00000121722 873 ntBASIC27.49■■□□□ 1.99
Col20a1Q923P0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.49■■□□□ 1.99
Col20a1Q923P0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.49■■□□□ 1.99
Col20a1Q923P0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.49■■□□□ 1.99
Col20a1Q923P0 Gm5786-201ENSMUST00000085368 882 ntBASIC27.49■■□□□ 1.99
Col20a1Q923P0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Col20a1Q923P0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.49■■□□□ 1.99
Col20a1Q923P0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Col20a1Q923P0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Col20a1Q923P0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.48■■□□□ 1.99
Col20a1Q923P0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Col20a1Q923P0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col20a1Q923P0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col20a1Q923P0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Col20a1Q923P0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Col20a1Q923P0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Col20a1Q923P0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Col20a1Q923P0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col20a1Q923P0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col20a1Q923P0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
Col20a1Q923P0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col20a1Q923P0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC27.45■■□□□ 1.99
Col20a1Q923P0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Col20a1Q923P0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col20a1Q923P0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
Col20a1Q923P0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Col20a1Q923P0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Col20a1Q923P0 Terc-201ENSMUST00000082862 423 ntBASIC27.44■■□□□ 1.98
Col20a1Q923P0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.44■■□□□ 1.98
Col20a1Q923P0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Col20a1Q923P0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Col20a1Q923P0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Col20a1Q923P0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Col20a1Q923P0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Col20a1Q923P0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Col20a1Q923P0 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.42■■□□□ 1.98
Col20a1Q923P0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col20a1Q923P0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col20a1Q923P0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Col20a1Q923P0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.41■■□□□ 1.98
Col20a1Q923P0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Col20a1Q923P0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Col20a1Q923P0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC27.4■■□□□ 1.98
Col20a1Q923P0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Col20a1Q923P0 Gm27502-201ENSMUST00000183495 199 ntBASIC27.4■■□□□ 1.98
Col20a1Q923P0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Col20a1Q923P0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col20a1Q923P0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col20a1Q923P0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC27.38■■□□□ 1.97
Col20a1Q923P0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col20a1Q923P0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col20a1Q923P0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col20a1Q923P0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.36■■□□□ 1.97
Col20a1Q923P0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Col20a1Q923P0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Col20a1Q923P0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Col20a1Q923P0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col20a1Q923P0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Col20a1Q923P0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.34■■□□□ 1.97
Col20a1Q923P0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Col20a1Q923P0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Col20a1Q923P0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Col20a1Q923P0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.33■■□□□ 1.97
Col20a1Q923P0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Col20a1Q923P0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Col20a1Q923P0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col20a1Q923P0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col20a1Q923P0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col20a1Q923P0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Col20a1Q923P0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.31■■□□□ 1.96
Col20a1Q923P0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col20a1Q923P0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Col20a1Q923P0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Col20a1Q923P0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.3■■□□□ 1.96
Col20a1Q923P0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col20a1Q923P0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Col20a1Q923P0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Col20a1Q923P0 Gm14523-201ENSMUST00000117260 558 ntBASIC27.3■■□□□ 1.96
Col20a1Q923P0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Col20a1Q923P0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
Col20a1Q923P0 Gm7332-201ENSMUST00000118351 454 ntBASIC27.28■■□□□ 1.96
Col20a1Q923P0 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.27■■□□□ 1.96
Col20a1Q923P0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
Col20a1Q923P0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col20a1Q923P0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Col20a1Q923P0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.25■■□□□ 1.95
Col20a1Q923P0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Col20a1Q923P0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col20a1Q923P0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
Col20a1Q923P0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Col20a1Q923P0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Col20a1Q923P0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.23■■□□□ 1.95
Col20a1Q923P0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Col20a1Q923P0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
Col20a1Q923P0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Col20a1Q923P0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Col20a1Q923P0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Col20a1Q923P0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Col20a1Q923P0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms