Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdha1Q91Y21 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha1Q91Y21 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdha1Q91Y21 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Gm11687-201ENSMUST00000118911 886 ntBASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdha1Q91Y21 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Pcdha1Q91Y21 Gm16437-201ENSMUST00000025669 507 ntBASIC24.02■■□□□ 1.44
Pcdha1Q91Y21 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.02■■□□□ 1.44
Pcdha1Q91Y21 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.02■■□□□ 1.44
Pcdha1Q91Y21 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdha1Q91Y21 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdha1Q91Y21 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.99■■□□□ 1.43
Pcdha1Q91Y21 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha1Q91Y21 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.98■■□□□ 1.43
Pcdha1Q91Y21 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha1Q91Y21 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdha1Q91Y21 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.97■■□□□ 1.43
Pcdha1Q91Y21 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdha1Q91Y21 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Pcdha1Q91Y21 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.95■■□□□ 1.42
Pcdha1Q91Y21 Gm9812-201ENSMUST00000061934 968 ntBASIC23.95■■□□□ 1.42
Pcdha1Q91Y21 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
Pcdha1Q91Y21 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha1Q91Y21 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha1Q91Y21 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha1Q91Y21 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.93■■□□□ 1.42
Pcdha1Q91Y21 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha1Q91Y21 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha1Q91Y21 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha1Q91Y21 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha1Q91Y21 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha1Q91Y21 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcdha1Q91Y21 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha1Q91Y21 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha1Q91Y21 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha1Q91Y21 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdha1Q91Y21 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.89■■□□□ 1.41
Pcdha1Q91Y21 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha1Q91Y21 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Gm12366-201ENSMUST00000121722 873 ntBASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Gm5786-201ENSMUST00000085368 882 ntBASIC23.88■■□□□ 1.41
Pcdha1Q91Y21 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha1Q91Y21 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Pcdha1Q91Y21 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdha1Q91Y21 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha1Q91Y21 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha1Q91Y21 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.85■■□□□ 1.41
Pcdha1Q91Y21 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha1Q91Y21 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdha1Q91Y21 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha1Q91Y21 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.83■■□□□ 1.41
Pcdha1Q91Y21 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdha1Q91Y21 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.83■■□□□ 1.4
Pcdha1Q91Y21 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdha1Q91Y21 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.82■■□□□ 1.4
Pcdha1Q91Y21 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha1Q91Y21 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha1Q91Y21 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha1Q91Y21 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha1Q91Y21 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.79■■□□□ 1.4
Pcdha1Q91Y21 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms