Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb6Q91XZ4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb6Q91XZ4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb6Q91XZ4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.74■■□□□ 1.39
Pcdhb6Q91XZ4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb6Q91XZ4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb6Q91XZ4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhb6Q91XZ4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb6Q91XZ4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb6Q91XZ4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Pcdhb6Q91XZ4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdhb6Q91XZ4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb6Q91XZ4 Gm7432-201ENSMUST00000210343 879 ntBASIC23.69■■□□□ 1.38
Pcdhb6Q91XZ4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb6Q91XZ4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb6Q91XZ4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb6Q91XZ4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb6Q91XZ4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb6Q91XZ4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.68■■□□□ 1.38
Pcdhb6Q91XZ4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Pcdhb6Q91XZ4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb6Q91XZ4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb6Q91XZ4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb6Q91XZ4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb6Q91XZ4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb6Q91XZ4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb6Q91XZ4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb6Q91XZ4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb6Q91XZ4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pcdhb6Q91XZ4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb6Q91XZ4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Pcdhb6Q91XZ4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb6Q91XZ4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.66■■□□□ 1.38
Pcdhb6Q91XZ4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.66■■□□□ 1.38
Pcdhb6Q91XZ4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb6Q91XZ4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb6Q91XZ4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.66■■□□□ 1.38
Pcdhb6Q91XZ4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb6Q91XZ4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
Pcdhb6Q91XZ4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb6Q91XZ4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Pcdhb6Q91XZ4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb6Q91XZ4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb6Q91XZ4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb6Q91XZ4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb6Q91XZ4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb6Q91XZ4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb6Q91XZ4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb6Q91XZ4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb6Q91XZ4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Pcdhb6Q91XZ4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb6Q91XZ4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb6Q91XZ4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb6Q91XZ4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb6Q91XZ4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhb6Q91XZ4 Gm11599-201ENSMUST00000118720 878 ntBASIC23.59■■□□□ 1.37
Pcdhb6Q91XZ4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Pcdhb6Q91XZ4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.58■■□□□ 1.36
Pcdhb6Q91XZ4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.57■■□□□ 1.36
Pcdhb6Q91XZ4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhb6Q91XZ4 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.56■■□□□ 1.36
Pcdhb6Q91XZ4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb6Q91XZ4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb6Q91XZ4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb6Q91XZ4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb6Q91XZ4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb6Q91XZ4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb6Q91XZ4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb6Q91XZ4 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.55■■□□□ 1.36
Pcdhb6Q91XZ4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb6Q91XZ4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb6Q91XZ4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb6Q91XZ4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb6Q91XZ4 Gm4799-201ENSMUST00000095396 657 ntBASIC23.54■■□□□ 1.36
Pcdhb6Q91XZ4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb6Q91XZ4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb6Q91XZ4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
Pcdhb6Q91XZ4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb6Q91XZ4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.53■■□□□ 1.36
Pcdhb6Q91XZ4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb6Q91XZ4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb6Q91XZ4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb6Q91XZ4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb6Q91XZ4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb6Q91XZ4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb6Q91XZ4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb6Q91XZ4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb6Q91XZ4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Pcdhb6Q91XZ4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Pcdhb6Q91XZ4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Pcdhb6Q91XZ4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb6Q91XZ4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb6Q91XZ4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb6Q91XZ4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Pcdhb6Q91XZ4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Pcdhb6Q91XZ4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb6Q91XZ4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdhb6Q91XZ4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb6Q91XZ4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.48■■□□□ 1.35
Pcdhb6Q91XZ4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.48■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms