Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tram1Q91V04 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tram1Q91V04 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tram1Q91V04 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tram1Q91V04 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tram1Q91V04 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.7■□□□□ 0.74
Tram1Q91V04 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tram1Q91V04 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tram1Q91V04 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tram1Q91V04 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.7■□□□□ 0.74
Tram1Q91V04 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tram1Q91V04 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tram1Q91V04 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tram1Q91V04 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tram1Q91V04 Gm8109-201ENSMUST00000194076 746 ntBASIC19.69■□□□□ 0.74
Tram1Q91V04 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.68■□□□□ 0.74
Tram1Q91V04 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tram1Q91V04 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tram1Q91V04 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tram1Q91V04 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tram1Q91V04 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tram1Q91V04 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tram1Q91V04 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tram1Q91V04 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tram1Q91V04 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tram1Q91V04 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tram1Q91V04 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Tram1Q91V04 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.65■□□□□ 0.74
Tram1Q91V04 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tram1Q91V04 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.65■□□□□ 0.74
Tram1Q91V04 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tram1Q91V04 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tram1Q91V04 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tram1Q91V04 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.64■□□□□ 0.73
Tram1Q91V04 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tram1Q91V04 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tram1Q91V04 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tram1Q91V04 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tram1Q91V04 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tram1Q91V04 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tram1Q91V04 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tram1Q91V04 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tram1Q91V04 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Tram1Q91V04 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tram1Q91V04 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tram1Q91V04 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tram1Q91V04 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Tram1Q91V04 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tram1Q91V04 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Tram1Q91V04 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tram1Q91V04 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tram1Q91V04 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Tram1Q91V04 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tram1Q91V04 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tram1Q91V04 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tram1Q91V04 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tram1Q91V04 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Tram1Q91V04 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tram1Q91V04 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tram1Q91V04 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tram1Q91V04 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Tram1Q91V04 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tram1Q91V04 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.59■□□□□ 0.73
Tram1Q91V04 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tram1Q91V04 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tram1Q91V04 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tram1Q91V04 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tram1Q91V04 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tram1Q91V04 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tram1Q91V04 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tram1Q91V04 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tram1Q91V04 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tram1Q91V04 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.57■□□□□ 0.72
Tram1Q91V04 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tram1Q91V04 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Tram1Q91V04 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tram1Q91V04 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tram1Q91V04 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Tram1Q91V04 Gm24804-201ENSMUST00000174982 85 ntBASIC19.56■□□□□ 0.72
Tram1Q91V04 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Tram1Q91V04 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tram1Q91V04 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tram1Q91V04 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tram1Q91V04 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tram1Q91V04 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tram1Q91V04 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Tram1Q91V04 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tram1Q91V04 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tram1Q91V04 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tram1Q91V04 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.55■□□□□ 0.72
Tram1Q91V04 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tram1Q91V04 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tram1Q91V04 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tram1Q91V04 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tram1Q91V04 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tram1Q91V04 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tram1Q91V04 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tram1Q91V04 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tram1Q91V04 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tram1Q91V04 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms