Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retreg1dQ8VE91 Gm45364-201ENSMUST00000210883 159 ntBASIC22.54■■□□□ 1.2
Retreg1dQ8VE91 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retreg1dQ8VE91 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retreg1dQ8VE91 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retreg1dQ8VE91 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.53■■□□□ 1.2
Retreg1dQ8VE91 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
Retreg1dQ8VE91 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retreg1dQ8VE91 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retreg1dQ8VE91 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Retreg1dQ8VE91 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retreg1dQ8VE91 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.51■■□□□ 1.19
Retreg1dQ8VE91 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retreg1dQ8VE91 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retreg1dQ8VE91 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.5■■□□□ 1.19
Retreg1dQ8VE91 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retreg1dQ8VE91 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retreg1dQ8VE91 Gm9806-201ENSMUST00000051080 552 ntBASIC22.5■■□□□ 1.19
Retreg1dQ8VE91 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 Gm16437-201ENSMUST00000025669 507 ntBASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 Cap2-205ENSMUST00000225824 1634 ntBASIC22.49■■□□□ 1.19
Retreg1dQ8VE91 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Retreg1dQ8VE91 Gm11687-201ENSMUST00000118911 886 ntBASIC22.48■■□□□ 1.19
Retreg1dQ8VE91 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.48■■□□□ 1.19
Retreg1dQ8VE91 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retreg1dQ8VE91 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg1dQ8VE91 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg1dQ8VE91 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg1dQ8VE91 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg1dQ8VE91 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg1dQ8VE91 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retreg1dQ8VE91 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.46■■□□□ 1.19
Retreg1dQ8VE91 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retreg1dQ8VE91 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retreg1dQ8VE91 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retreg1dQ8VE91 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.46■■□□□ 1.19
Retreg1dQ8VE91 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.46■■□□□ 1.19
Retreg1dQ8VE91 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retreg1dQ8VE91 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retreg1dQ8VE91 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Retreg1dQ8VE91 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retreg1dQ8VE91 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Retreg1dQ8VE91 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retreg1dQ8VE91 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retreg1dQ8VE91 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retreg1dQ8VE91 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retreg1dQ8VE91 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Retreg1dQ8VE91 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retreg1dQ8VE91 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.43■■□□□ 1.18
Retreg1dQ8VE91 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.43■■□□□ 1.18
Retreg1dQ8VE91 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retreg1dQ8VE91 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Retreg1dQ8VE91 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retreg1dQ8VE91 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retreg1dQ8VE91 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retreg1dQ8VE91 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retreg1dQ8VE91 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retreg1dQ8VE91 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.4■■□□□ 1.18
Retreg1dQ8VE91 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retreg1dQ8VE91 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.4■■□□□ 1.18
Retreg1dQ8VE91 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.39■■□□□ 1.18
Retreg1dQ8VE91 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Retreg1dQ8VE91 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Retreg1dQ8VE91 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Retreg1dQ8VE91 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retreg1dQ8VE91 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retreg1dQ8VE91 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retreg1dQ8VE91 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retreg1dQ8VE91 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Retreg1dQ8VE91 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.37■■□□□ 1.17
Retreg1dQ8VE91 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.37■■□□□ 1.17
Retreg1dQ8VE91 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Retreg1dQ8VE91 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retreg1dQ8VE91 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retreg1dQ8VE91 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retreg1dQ8VE91 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retreg1dQ8VE91 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Retreg1dQ8VE91 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retreg1dQ8VE91 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.35■■□□□ 1.17
Retreg1dQ8VE91 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retreg1dQ8VE91 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Retreg1dQ8VE91 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retreg1dQ8VE91 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Retreg1dQ8VE91 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms