Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.62■■□□□ 1.05
Ndc1Q8VCB1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ndc1Q8VCB1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.61■■□□□ 1.05
Ndc1Q8VCB1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ndc1Q8VCB1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.61■■□□□ 1.05
Ndc1Q8VCB1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ndc1Q8VCB1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ndc1Q8VCB1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ndc1Q8VCB1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ndc1Q8VCB1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ndc1Q8VCB1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.59■■□□□ 1.05
Ndc1Q8VCB1 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.58■■□□□ 1.05
Ndc1Q8VCB1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ndc1Q8VCB1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ndc1Q8VCB1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ndc1Q8VCB1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.58■■□□□ 1.05
Ndc1Q8VCB1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ndc1Q8VCB1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ndc1Q8VCB1 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.58■■□□□ 1.04
Ndc1Q8VCB1 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.58■■□□□ 1.04
Ndc1Q8VCB1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ndc1Q8VCB1 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ndc1Q8VCB1 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ndc1Q8VCB1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ndc1Q8VCB1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ndc1Q8VCB1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndc1Q8VCB1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndc1Q8VCB1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.55■■□□□ 1.04
Ndc1Q8VCB1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndc1Q8VCB1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ndc1Q8VCB1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ndc1Q8VCB1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ndc1Q8VCB1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ndc1Q8VCB1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.53■■□□□ 1.04
Ndc1Q8VCB1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ndc1Q8VCB1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ndc1Q8VCB1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ndc1Q8VCB1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.51■■□□□ 1.03
Ndc1Q8VCB1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.5■■□□□ 1.03
Ndc1Q8VCB1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.5■■□□□ 1.03
Ndc1Q8VCB1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ndc1Q8VCB1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ndc1Q8VCB1 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ndc1Q8VCB1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ndc1Q8VCB1 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.49■■□□□ 1.03
Ndc1Q8VCB1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ndc1Q8VCB1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ndc1Q8VCB1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ndc1Q8VCB1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ndc1Q8VCB1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndc1Q8VCB1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.48■■□□□ 1.03
Ndc1Q8VCB1 Gm9812-201ENSMUST00000061934 968 ntBASIC21.48■■□□□ 1.03
Ndc1Q8VCB1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndc1Q8VCB1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.48■■□□□ 1.03
Ndc1Q8VCB1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.48■■□□□ 1.03
Ndc1Q8VCB1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ndc1Q8VCB1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndc1Q8VCB1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ndc1Q8VCB1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.47■■□□□ 1.03
Ndc1Q8VCB1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Ndc1Q8VCB1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndc1Q8VCB1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ndc1Q8VCB1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.46■■□□□ 1.03
Ndc1Q8VCB1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndc1Q8VCB1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndc1Q8VCB1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ndc1Q8VCB1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ndc1Q8VCB1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.45■■□□□ 1.02
Ndc1Q8VCB1 Gm12366-201ENSMUST00000121722 873 ntBASIC21.45■■□□□ 1.02
Ndc1Q8VCB1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.45■■□□□ 1.02
Ndc1Q8VCB1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.45■■□□□ 1.02
Ndc1Q8VCB1 Gm5786-201ENSMUST00000085368 882 ntBASIC21.45■■□□□ 1.02
Ndc1Q8VCB1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ndc1Q8VCB1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ndc1Q8VCB1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndc1Q8VCB1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ndc1Q8VCB1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ndc1Q8VCB1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.44■■□□□ 1.02
Ndc1Q8VCB1 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.44■■□□□ 1.02
Ndc1Q8VCB1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndc1Q8VCB1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ndc1Q8VCB1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ndc1Q8VCB1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ndc1Q8VCB1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Ndc1Q8VCB1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ndc1Q8VCB1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ndc1Q8VCB1 Gm27502-201ENSMUST00000183495 199 ntBASIC21.42■■□□□ 1.02
Ndc1Q8VCB1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ndc1Q8VCB1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ndc1Q8VCB1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ndc1Q8VCB1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ndc1Q8VCB1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Ndc1Q8VCB1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ndc1Q8VCB1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.41■■□□□ 1.02
Ndc1Q8VCB1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ndc1Q8VCB1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ndc1Q8VCB1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ndc1Q8VCB1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ndc1Q8VCB1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ndc1Q8VCB1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms