Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ssx2ipQ8VC66 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ssx2ipQ8VC66 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ssx2ipQ8VC66 Gm7432-201ENSMUST00000210343 879 ntBASIC23.32■■□□□ 1.32
Ssx2ipQ8VC66 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ssx2ipQ8VC66 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ssx2ipQ8VC66 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.32■■□□□ 1.32
Ssx2ipQ8VC66 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.31■■□□□ 1.32
Ssx2ipQ8VC66 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.31■■□□□ 1.32
Ssx2ipQ8VC66 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ssx2ipQ8VC66 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ssx2ipQ8VC66 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ssx2ipQ8VC66 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ssx2ipQ8VC66 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.3■■□□□ 1.32
Ssx2ipQ8VC66 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.29■■□□□ 1.32
Ssx2ipQ8VC66 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ssx2ipQ8VC66 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.28■■□□□ 1.32
Ssx2ipQ8VC66 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ssx2ipQ8VC66 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ssx2ipQ8VC66 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ssx2ipQ8VC66 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.27■■□□□ 1.32
Ssx2ipQ8VC66 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ssx2ipQ8VC66 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ssx2ipQ8VC66 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ssx2ipQ8VC66 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.26■■□□□ 1.31
Ssx2ipQ8VC66 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Ssx2ipQ8VC66 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Ssx2ipQ8VC66 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ssx2ipQ8VC66 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.24■■□□□ 1.31
Ssx2ipQ8VC66 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ssx2ipQ8VC66 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ssx2ipQ8VC66 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Ssx2ipQ8VC66 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ssx2ipQ8VC66 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ssx2ipQ8VC66 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ssx2ipQ8VC66 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ssx2ipQ8VC66 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ssx2ipQ8VC66 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ssx2ipQ8VC66 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ssx2ipQ8VC66 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.18■■□□□ 1.3
Ssx2ipQ8VC66 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ssx2ipQ8VC66 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ssx2ipQ8VC66 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ssx2ipQ8VC66 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ssx2ipQ8VC66 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ssx2ipQ8VC66 Gm11599-201ENSMUST00000118720 878 ntBASIC23.17■■□□□ 1.3
Ssx2ipQ8VC66 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ssx2ipQ8VC66 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ssx2ipQ8VC66 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ssx2ipQ8VC66 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ssx2ipQ8VC66 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssx2ipQ8VC66 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssx2ipQ8VC66 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ssx2ipQ8VC66 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Ssx2ipQ8VC66 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ssx2ipQ8VC66 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.15■■□□□ 1.3
Ssx2ipQ8VC66 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.14■■□□□ 1.3
Ssx2ipQ8VC66 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Ssx2ipQ8VC66 Gm37136-201ENSMUST00000194368 194 ntBASIC23.14■■□□□ 1.29
Ssx2ipQ8VC66 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ssx2ipQ8VC66 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssx2ipQ8VC66 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ssx2ipQ8VC66 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssx2ipQ8VC66 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssx2ipQ8VC66 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ssx2ipQ8VC66 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ssx2ipQ8VC66 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssx2ipQ8VC66 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssx2ipQ8VC66 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssx2ipQ8VC66 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ssx2ipQ8VC66 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssx2ipQ8VC66 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ssx2ipQ8VC66 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ssx2ipQ8VC66 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ssx2ipQ8VC66 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ssx2ipQ8VC66 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ssx2ipQ8VC66 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC23.1■■□□□ 1.29
Ssx2ipQ8VC66 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ssx2ipQ8VC66 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ssx2ipQ8VC66 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssx2ipQ8VC66 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssx2ipQ8VC66 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ssx2ipQ8VC66 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ssx2ipQ8VC66 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC23.08■■□□□ 1.29
Ssx2ipQ8VC66 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ssx2ipQ8VC66 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Ssx2ipQ8VC66 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssx2ipQ8VC66 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssx2ipQ8VC66 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssx2ipQ8VC66 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ssx2ipQ8VC66 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms