Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Vps39Q8R5L3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps39Q8R5L3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps39Q8R5L3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps39Q8R5L3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps39Q8R5L3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps39Q8R5L3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps39Q8R5L3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps39Q8R5L3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vps39Q8R5L3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.92■■□□□ 1.26
Vps39Q8R5L3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps39Q8R5L3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vps39Q8R5L3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vps39Q8R5L3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Vps39Q8R5L3 Gm6821-201ENSMUST00000107540 542 ntBASIC22.9■■□□□ 1.26
Vps39Q8R5L3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps39Q8R5L3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps39Q8R5L3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Vps39Q8R5L3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.89■■□□□ 1.26
Vps39Q8R5L3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Vps39Q8R5L3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.89■■□□□ 1.25
Vps39Q8R5L3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vps39Q8R5L3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vps39Q8R5L3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vps39Q8R5L3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vps39Q8R5L3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vps39Q8R5L3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.88■■□□□ 1.25
Vps39Q8R5L3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.88■■□□□ 1.25
Vps39Q8R5L3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vps39Q8R5L3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vps39Q8R5L3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Vps39Q8R5L3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Vps39Q8R5L3 Gm37136-201ENSMUST00000194368 194 ntBASIC22.86■■□□□ 1.25
Vps39Q8R5L3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vps39Q8R5L3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vps39Q8R5L3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vps39Q8R5L3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Vps39Q8R5L3 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.83■■□□□ 1.25
Vps39Q8R5L3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Vps39Q8R5L3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Vps39Q8R5L3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Vps39Q8R5L3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Vps39Q8R5L3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Vps39Q8R5L3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Vps39Q8R5L3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Vps39Q8R5L3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vps39Q8R5L3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vps39Q8R5L3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vps39Q8R5L3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vps39Q8R5L3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vps39Q8R5L3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Vps39Q8R5L3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Vps39Q8R5L3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Vps39Q8R5L3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Vps39Q8R5L3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vps39Q8R5L3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Vps39Q8R5L3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Vps39Q8R5L3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Vps39Q8R5L3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.78■■□□□ 1.24
Vps39Q8R5L3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps39Q8R5L3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps39Q8R5L3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps39Q8R5L3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Vps39Q8R5L3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vps39Q8R5L3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Vps39Q8R5L3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Vps39Q8R5L3 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.76■■□□□ 1.23
Vps39Q8R5L3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.75■■□□□ 1.23
Vps39Q8R5L3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vps39Q8R5L3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Vps39Q8R5L3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vps39Q8R5L3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Vps39Q8R5L3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.74■■□□□ 1.23
Vps39Q8R5L3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vps39Q8R5L3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vps39Q8R5L3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Vps39Q8R5L3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps39Q8R5L3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps39Q8R5L3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Vps39Q8R5L3 Gm8503-201ENSMUST00000118131 455 ntBASIC22.73■■□□□ 1.23
Vps39Q8R5L3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Vps39Q8R5L3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Vps39Q8R5L3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vps39Q8R5L3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Vps39Q8R5L3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.72■■□□□ 1.23
Vps39Q8R5L3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Vps39Q8R5L3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Vps39Q8R5L3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Vps39Q8R5L3 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.71■■□□□ 1.23
Vps39Q8R5L3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms