Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Top1mtQ8R4U6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
Top1mtQ8R4U6 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.55■■■□□ 2
Top1mtQ8R4U6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Top1mtQ8R4U6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Top1mtQ8R4U6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Top1mtQ8R4U6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.53■■■□□ 2
Top1mtQ8R4U6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Top1mtQ8R4U6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Top1mtQ8R4U6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.53■■■□□ 2
Top1mtQ8R4U6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC27.52■■■□□ 2
Top1mtQ8R4U6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.52■■■□□ 2
Top1mtQ8R4U6 Gm7432-201ENSMUST00000210343 879 ntBASIC27.52■■■□□ 2
Top1mtQ8R4U6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Top1mtQ8R4U6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Top1mtQ8R4U6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Top1mtQ8R4U6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Top1mtQ8R4U6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Top1mtQ8R4U6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Top1mtQ8R4U6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Top1mtQ8R4U6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Top1mtQ8R4U6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Top1mtQ8R4U6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Top1mtQ8R4U6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.48■■□□□ 1.99
Top1mtQ8R4U6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Top1mtQ8R4U6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.48■■□□□ 1.99
Top1mtQ8R4U6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC27.48■■□□□ 1.99
Top1mtQ8R4U6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
Top1mtQ8R4U6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
Top1mtQ8R4U6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Top1mtQ8R4U6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.47■■□□□ 1.99
Top1mtQ8R4U6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.47■■□□□ 1.99
Top1mtQ8R4U6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Top1mtQ8R4U6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
Top1mtQ8R4U6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Top1mtQ8R4U6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Top1mtQ8R4U6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Top1mtQ8R4U6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Top1mtQ8R4U6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
Top1mtQ8R4U6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Top1mtQ8R4U6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.44■■□□□ 1.98
Top1mtQ8R4U6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Top1mtQ8R4U6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Top1mtQ8R4U6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Top1mtQ8R4U6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
Top1mtQ8R4U6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Top1mtQ8R4U6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Top1mtQ8R4U6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Top1mtQ8R4U6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Top1mtQ8R4U6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
Top1mtQ8R4U6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Top1mtQ8R4U6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Top1mtQ8R4U6 Gm11599-201ENSMUST00000118720 878 ntBASIC27.41■■□□□ 1.98
Top1mtQ8R4U6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Top1mtQ8R4U6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Top1mtQ8R4U6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Top1mtQ8R4U6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Top1mtQ8R4U6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Top1mtQ8R4U6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Top1mtQ8R4U6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Top1mtQ8R4U6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
Top1mtQ8R4U6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Top1mtQ8R4U6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Top1mtQ8R4U6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Top1mtQ8R4U6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Top1mtQ8R4U6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Top1mtQ8R4U6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Top1mtQ8R4U6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Top1mtQ8R4U6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC27.35■■□□□ 1.97
Top1mtQ8R4U6 Gm4799-201ENSMUST00000095396 657 ntBASIC27.35■■□□□ 1.97
Top1mtQ8R4U6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Top1mtQ8R4U6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Top1mtQ8R4U6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Top1mtQ8R4U6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Top1mtQ8R4U6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Top1mtQ8R4U6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Top1mtQ8R4U6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Top1mtQ8R4U6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Top1mtQ8R4U6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Top1mtQ8R4U6 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.32■■□□□ 1.96
Top1mtQ8R4U6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Top1mtQ8R4U6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.31■■□□□ 1.96
Top1mtQ8R4U6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Top1mtQ8R4U6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
Top1mtQ8R4U6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Top1mtQ8R4U6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Top1mtQ8R4U6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Top1mtQ8R4U6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.29■■□□□ 1.96
Top1mtQ8R4U6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Top1mtQ8R4U6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Top1mtQ8R4U6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Top1mtQ8R4U6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Top1mtQ8R4U6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Top1mtQ8R4U6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Top1mtQ8R4U6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Top1mtQ8R4U6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.28■■□□□ 1.96
Top1mtQ8R4U6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Top1mtQ8R4U6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Top1mtQ8R4U6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Top1mtQ8R4U6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms