Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup35Q8R4R6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nup35Q8R4R6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.74■□□□□ 0.59
Nup35Q8R4R6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nup35Q8R4R6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nup35Q8R4R6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup35Q8R4R6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup35Q8R4R6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nup35Q8R4R6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Nup35Q8R4R6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nup35Q8R4R6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.71■□□□□ 0.59
Nup35Q8R4R6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup35Q8R4R6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.71■□□□□ 0.59
Nup35Q8R4R6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nup35Q8R4R6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.71■□□□□ 0.59
Nup35Q8R4R6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nup35Q8R4R6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nup35Q8R4R6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup35Q8R4R6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup35Q8R4R6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nup35Q8R4R6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nup35Q8R4R6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nup35Q8R4R6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nup35Q8R4R6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.68■□□□□ 0.58
Nup35Q8R4R6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nup35Q8R4R6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nup35Q8R4R6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Nup35Q8R4R6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nup35Q8R4R6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nup35Q8R4R6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup35Q8R4R6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup35Q8R4R6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.65■□□□□ 0.58
Nup35Q8R4R6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup35Q8R4R6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Nup35Q8R4R6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nup35Q8R4R6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.64■□□□□ 0.57
Nup35Q8R4R6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Nup35Q8R4R6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Nup35Q8R4R6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup35Q8R4R6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup35Q8R4R6 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nup35Q8R4R6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nup35Q8R4R6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Nup35Q8R4R6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nup35Q8R4R6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup35Q8R4R6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nup35Q8R4R6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nup35Q8R4R6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup35Q8R4R6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup35Q8R4R6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nup35Q8R4R6 Zfp131-205ENSMUST00000223812 663 ntBASIC18.62■□□□□ 0.57
Nup35Q8R4R6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nup35Q8R4R6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nup35Q8R4R6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nup35Q8R4R6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nup35Q8R4R6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup35Q8R4R6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nup35Q8R4R6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nup35Q8R4R6 Gm24970-201ENSMUST00000175582 82 ntBASIC18.6■□□□□ 0.57
Nup35Q8R4R6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.6■□□□□ 0.57
Nup35Q8R4R6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Nup35Q8R4R6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup35Q8R4R6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup35Q8R4R6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nup35Q8R4R6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.59■□□□□ 0.57
Nup35Q8R4R6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup35Q8R4R6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nup35Q8R4R6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup35Q8R4R6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.58■□□□□ 0.57
Nup35Q8R4R6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms