Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc58Q8R3Q6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ccdc58Q8R3Q6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc58Q8R3Q6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc58Q8R3Q6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ccdc58Q8R3Q6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.46■□□□□ 0.87
Ccdc58Q8R3Q6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc58Q8R3Q6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc58Q8R3Q6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc58Q8R3Q6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccdc58Q8R3Q6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc58Q8R3Q6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ccdc58Q8R3Q6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc58Q8R3Q6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc58Q8R3Q6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc58Q8R3Q6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc58Q8R3Q6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc58Q8R3Q6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc58Q8R3Q6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc58Q8R3Q6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc58Q8R3Q6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc58Q8R3Q6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc58Q8R3Q6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc58Q8R3Q6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc58Q8R3Q6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc58Q8R3Q6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccdc58Q8R3Q6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc58Q8R3Q6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc58Q8R3Q6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc58Q8R3Q6 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc58Q8R3Q6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc58Q8R3Q6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc58Q8R3Q6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.39■□□□□ 0.85
Ccdc58Q8R3Q6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc58Q8R3Q6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc58Q8R3Q6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc58Q8R3Q6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc58Q8R3Q6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc58Q8R3Q6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc58Q8R3Q6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccdc58Q8R3Q6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc58Q8R3Q6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc58Q8R3Q6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc58Q8R3Q6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc58Q8R3Q6 Particl-201ENSMUST00000205370 1560 ntBASIC20.37■□□□□ 0.85
Ccdc58Q8R3Q6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ccdc58Q8R3Q6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc58Q8R3Q6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc58Q8R3Q6 Notumos-201ENSMUST00000151998 2659 ntBASIC20.36■□□□□ 0.85
Ccdc58Q8R3Q6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc58Q8R3Q6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc58Q8R3Q6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc58Q8R3Q6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc58Q8R3Q6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc58Q8R3Q6 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.35■□□□□ 0.85
Ccdc58Q8R3Q6 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.35■□□□□ 0.85
Ccdc58Q8R3Q6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc58Q8R3Q6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.34■□□□□ 0.85
Ccdc58Q8R3Q6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc58Q8R3Q6 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.33■□□□□ 0.85
Ccdc58Q8R3Q6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.33■□□□□ 0.85
Ccdc58Q8R3Q6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc58Q8R3Q6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc58Q8R3Q6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc58Q8R3Q6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc58Q8R3Q6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc58Q8R3Q6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc58Q8R3Q6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc58Q8R3Q6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc58Q8R3Q6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc58Q8R3Q6 Zfp131-205ENSMUST00000223812 663 ntBASIC20.3■□□□□ 0.84
Ccdc58Q8R3Q6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc58Q8R3Q6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc58Q8R3Q6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc58Q8R3Q6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc58Q8R3Q6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc58Q8R3Q6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc58Q8R3Q6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc58Q8R3Q6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccdc58Q8R3Q6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Ccdc58Q8R3Q6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc58Q8R3Q6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc58Q8R3Q6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ccdc58Q8R3Q6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc58Q8R3Q6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc58Q8R3Q6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc58Q8R3Q6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc58Q8R3Q6 Gm24970-201ENSMUST00000175582 82 ntBASIC20.26■□□□□ 0.83
Ccdc58Q8R3Q6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.26■□□□□ 0.83
Ccdc58Q8R3Q6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc58Q8R3Q6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc58Q8R3Q6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms