Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC29.15■■■□□ 2.26
Col23a1Q8K4G2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Col23a1Q8K4G2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.15■■■□□ 2.26
Col23a1Q8K4G2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Col23a1Q8K4G2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC29.13■■■□□ 2.25
Col23a1Q8K4G2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col23a1Q8K4G2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC29.13■■■□□ 2.25
Col23a1Q8K4G2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Col23a1Q8K4G2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.13■■■□□ 2.25
Col23a1Q8K4G2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col23a1Q8K4G2 Gm13238-201ENSMUST00000117655 780 ntBASIC29.11■■■□□ 2.25
Col23a1Q8K4G2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Col23a1Q8K4G2 Gm15820-201ENSMUST00000201566 728 ntBASIC29.11■■■□□ 2.25
Col23a1Q8K4G2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Col23a1Q8K4G2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC29.1■■■□□ 2.25
Col23a1Q8K4G2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
Col23a1Q8K4G2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Col23a1Q8K4G2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Col23a1Q8K4G2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Col23a1Q8K4G2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Col23a1Q8K4G2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Col23a1Q8K4G2 Gm45102-201ENSMUST00000207427 857 ntBASIC29.07■■■□□ 2.24
Col23a1Q8K4G2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Col23a1Q8K4G2 Terc-201ENSMUST00000082862 423 ntBASIC29.07■■■□□ 2.24
Col23a1Q8K4G2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Col23a1Q8K4G2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col23a1Q8K4G2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC29.05■■■□□ 2.24
Col23a1Q8K4G2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Col23a1Q8K4G2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Col23a1Q8K4G2 Gm14117-201ENSMUST00000122417 843 ntBASIC29.03■■■□□ 2.24
Col23a1Q8K4G2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC29.03■■■□□ 2.24
Col23a1Q8K4G2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Col23a1Q8K4G2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Col23a1Q8K4G2 AC153911.1-201ENSMUST00000220378 758 ntBASIC29.02■■■□□ 2.24
Col23a1Q8K4G2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
Col23a1Q8K4G2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Col23a1Q8K4G2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC29.02■■■□□ 2.24
Col23a1Q8K4G2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col23a1Q8K4G2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC29■■■□□ 2.23
Col23a1Q8K4G2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col23a1Q8K4G2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC29■■■□□ 2.23
Col23a1Q8K4G2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC28.98■■■□□ 2.23
Col23a1Q8K4G2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Col23a1Q8K4G2 Gm43566-201ENSMUST00000196851 808 ntBASIC28.98■■■□□ 2.23
Col23a1Q8K4G2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.96■■■□□ 2.23
Col23a1Q8K4G2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.23
Col23a1Q8K4G2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC28.95■■■□□ 2.22
Col23a1Q8K4G2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC28.95■■■□□ 2.22
Col23a1Q8K4G2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Col23a1Q8K4G2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Col23a1Q8K4G2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col23a1Q8K4G2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.94■■■□□ 2.22
Col23a1Q8K4G2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC28.93■■■□□ 2.22
Col23a1Q8K4G2 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.93■■■□□ 2.22
Col23a1Q8K4G2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
Col23a1Q8K4G2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col23a1Q8K4G2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Col23a1Q8K4G2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
Col23a1Q8K4G2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC28.92■■■□□ 2.22
Col23a1Q8K4G2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Col23a1Q8K4G2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Col23a1Q8K4G2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
Col23a1Q8K4G2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Col23a1Q8K4G2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.91■■■□□ 2.22
Col23a1Q8K4G2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.9■■■□□ 2.22
Col23a1Q8K4G2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Col23a1Q8K4G2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
Col23a1Q8K4G2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col23a1Q8K4G2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Col23a1Q8K4G2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col23a1Q8K4G2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.21
Col23a1Q8K4G2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
Col23a1Q8K4G2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.87■■■□□ 2.21
Col23a1Q8K4G2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Col23a1Q8K4G2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Col23a1Q8K4G2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.86■■■□□ 2.21
Col23a1Q8K4G2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC28.85■■■□□ 2.21
Col23a1Q8K4G2 Gm9959-201ENSMUST00000068277 390 ntBASIC28.85■■■□□ 2.21
Col23a1Q8K4G2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Col23a1Q8K4G2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.84■■■□□ 2.21
Col23a1Q8K4G2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col23a1Q8K4G2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Col23a1Q8K4G2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Col23a1Q8K4G2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col23a1Q8K4G2 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.84■■■□□ 2.21
Col23a1Q8K4G2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Col23a1Q8K4G2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Col23a1Q8K4G2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Col23a1Q8K4G2 Gm44428-201ENSMUST00000204474 874 ntBASIC28.83■■■□□ 2.21
Col23a1Q8K4G2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 Gm45444-201ENSMUST00000211394 898 ntBASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col23a1Q8K4G2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Col23a1Q8K4G2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms