Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cchcr1Q8K2I2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Cchcr1Q8K2I2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cchcr1Q8K2I2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.14■■□□□ 1.94
Cchcr1Q8K2I2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cchcr1Q8K2I2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cchcr1Q8K2I2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cchcr1Q8K2I2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cchcr1Q8K2I2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cchcr1Q8K2I2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cchcr1Q8K2I2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.12■■□□□ 1.93
Cchcr1Q8K2I2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.12■■□□□ 1.93
Cchcr1Q8K2I2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cchcr1Q8K2I2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Cchcr1Q8K2I2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cchcr1Q8K2I2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cchcr1Q8K2I2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Cchcr1Q8K2I2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cchcr1Q8K2I2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cchcr1Q8K2I2 Il17rd-202ENSMUST00000223942 2186 ntBASIC27.1■■□□□ 1.93
Cchcr1Q8K2I2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.1■■□□□ 1.93
Cchcr1Q8K2I2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Cchcr1Q8K2I2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Cchcr1Q8K2I2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cchcr1Q8K2I2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Cchcr1Q8K2I2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cchcr1Q8K2I2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
Cchcr1Q8K2I2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cchcr1Q8K2I2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Cchcr1Q8K2I2 Gm6821-201ENSMUST00000107540 542 ntBASIC27.07■■□□□ 1.92
Cchcr1Q8K2I2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Cchcr1Q8K2I2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Cchcr1Q8K2I2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cchcr1Q8K2I2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cchcr1Q8K2I2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cchcr1Q8K2I2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cchcr1Q8K2I2 Gm42699-201ENSMUST00000198104 1657 ntBASIC27.05■■□□□ 1.92
Cchcr1Q8K2I2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Cchcr1Q8K2I2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cchcr1Q8K2I2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.04■■□□□ 1.92
Cchcr1Q8K2I2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cchcr1Q8K2I2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC27.04■■□□□ 1.92
Cchcr1Q8K2I2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cchcr1Q8K2I2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cchcr1Q8K2I2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Cchcr1Q8K2I2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cchcr1Q8K2I2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Cchcr1Q8K2I2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Cchcr1Q8K2I2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Cchcr1Q8K2I2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Cchcr1Q8K2I2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Cchcr1Q8K2I2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cchcr1Q8K2I2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Cchcr1Q8K2I2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cchcr1Q8K2I2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cchcr1Q8K2I2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.99■■□□□ 1.91
Cchcr1Q8K2I2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Cchcr1Q8K2I2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Cchcr1Q8K2I2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cchcr1Q8K2I2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.97■■□□□ 1.91
Cchcr1Q8K2I2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cchcr1Q8K2I2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cchcr1Q8K2I2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cchcr1Q8K2I2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cchcr1Q8K2I2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Cchcr1Q8K2I2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cchcr1Q8K2I2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Cchcr1Q8K2I2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cchcr1Q8K2I2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.94■■□□□ 1.9
Cchcr1Q8K2I2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cchcr1Q8K2I2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Cchcr1Q8K2I2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cchcr1Q8K2I2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.93■■□□□ 1.9
Cchcr1Q8K2I2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Cchcr1Q8K2I2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
Cchcr1Q8K2I2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Cchcr1Q8K2I2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cchcr1Q8K2I2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.92■■□□□ 1.9
Cchcr1Q8K2I2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cchcr1Q8K2I2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cchcr1Q8K2I2 Gm8503-201ENSMUST00000118131 455 ntBASIC26.91■■□□□ 1.9
Cchcr1Q8K2I2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cchcr1Q8K2I2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Cchcr1Q8K2I2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.9■■□□□ 1.9
Cchcr1Q8K2I2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cchcr1Q8K2I2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Cchcr1Q8K2I2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cchcr1Q8K2I2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cchcr1Q8K2I2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Cchcr1Q8K2I2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Cchcr1Q8K2I2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Cchcr1Q8K2I2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.87■■□□□ 1.89
Cchcr1Q8K2I2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cchcr1Q8K2I2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cchcr1Q8K2I2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Cchcr1Q8K2I2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
Cchcr1Q8K2I2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cchcr1Q8K2I2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.85■■□□□ 1.89
Cchcr1Q8K2I2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cchcr1Q8K2I2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms