Protein–RNA interactions for Protein: Q8K203

Neil3, Endonuclease 8-like 3, mousemouse

Known RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil3Q8K203 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Neil3Q8K203 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Neil3Q8K203 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.91■□□□□ 0.62
Neil3Q8K203 Nkain2-201ENSMUST00000092602 558 ntBASIC18.91■□□□□ 0.62
Neil3Q8K203 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Neil3Q8K203 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Neil3Q8K203 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Neil3Q8K203 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Neil3Q8K203 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Neil3Q8K203 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.89■□□□□ 0.61
Neil3Q8K203 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Neil3Q8K203 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.89■□□□□ 0.61
Neil3Q8K203 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Neil3Q8K203 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Neil3Q8K203 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Neil3Q8K203 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Neil3Q8K203 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Neil3Q8K203 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Neil3Q8K203 Gm6821-201ENSMUST00000107540 542 ntBASIC18.88■□□□□ 0.61
Neil3Q8K203 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Neil3Q8K203 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Neil3Q8K203 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Neil3Q8K203 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Neil3Q8K203 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.87■□□□□ 0.61
Neil3Q8K203 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Neil3Q8K203 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Neil3Q8K203 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Neil3Q8K203 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Neil3Q8K203 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Neil3Q8K203 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Neil3Q8K203 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Neil3Q8K203 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Neil3Q8K203 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Neil3Q8K203 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Neil3Q8K203 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Neil3Q8K203 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.85■□□□□ 0.61
Neil3Q8K203 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Neil3Q8K203 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Neil3Q8K203 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.85■□□□□ 0.61
Neil3Q8K203 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Neil3Q8K203 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
Neil3Q8K203 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Neil3Q8K203 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Neil3Q8K203 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.83■□□□□ 0.6
Neil3Q8K203 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Neil3Q8K203 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Neil3Q8K203 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Neil3Q8K203 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Neil3Q8K203 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Neil3Q8K203 Gm8503-201ENSMUST00000118131 455 ntBASIC18.81■□□□□ 0.6
Neil3Q8K203 Gm30023-201ENSMUST00000197970 889 ntBASIC18.81■□□□□ 0.6
Neil3Q8K203 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Neil3Q8K203 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Neil3Q8K203 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Neil3Q8K203 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Neil3Q8K203 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Neil3Q8K203 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Neil3Q8K203 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Neil3Q8K203 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.77■□□□□ 0.6
Neil3Q8K203 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.77■□□□□ 0.6
Neil3Q8K203 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Neil3Q8K203 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Neil3Q8K203 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Neil3Q8K203 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.77■□□□□ 0.6
Neil3Q8K203 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Neil3Q8K203 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Neil3Q8K203 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Neil3Q8K203 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Neil3Q8K203 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Neil3Q8K203 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.75■□□□□ 0.59
Neil3Q8K203 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Neil3Q8K203 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Neil3Q8K203 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.74■□□□□ 0.59
Neil3Q8K203 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil3Q8K203 Particl-201ENSMUST00000205370 1560 ntBASIC18.74■□□□□ 0.59
Neil3Q8K203 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Neil3Q8K203 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Neil3Q8K203 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.74■□□□□ 0.59
Neil3Q8K203 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.73■□□□□ 0.59
Neil3Q8K203 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.73■□□□□ 0.59
Neil3Q8K203 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Neil3Q8K203 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Neil3Q8K203 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Neil3Q8K203 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Neil3Q8K203 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.72■□□□□ 0.59
Neil3Q8K203 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Neil3Q8K203 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.71■□□□□ 0.59
Neil3Q8K203 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Neil3Q8K203 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Neil3Q8K203 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms