Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Gm7432-201ENSMUST00000210343 879 ntBASIC22.14■■□□□ 1.14
CroccQ8CJ40 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CroccQ8CJ40 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CroccQ8CJ40 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CroccQ8CJ40 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CroccQ8CJ40 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CroccQ8CJ40 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.13■■□□□ 1.13
CroccQ8CJ40 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
CroccQ8CJ40 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CroccQ8CJ40 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CroccQ8CJ40 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
CroccQ8CJ40 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.12■■□□□ 1.13
CroccQ8CJ40 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CroccQ8CJ40 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.12■■□□□ 1.13
CroccQ8CJ40 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.11■■□□□ 1.13
CroccQ8CJ40 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CroccQ8CJ40 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CroccQ8CJ40 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CroccQ8CJ40 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CroccQ8CJ40 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CroccQ8CJ40 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CroccQ8CJ40 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CroccQ8CJ40 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
CroccQ8CJ40 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CroccQ8CJ40 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
CroccQ8CJ40 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CroccQ8CJ40 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CroccQ8CJ40 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CroccQ8CJ40 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.07■■□□□ 1.12
CroccQ8CJ40 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CroccQ8CJ40 Gm11599-201ENSMUST00000118720 878 ntBASIC22.07■■□□□ 1.12
CroccQ8CJ40 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CroccQ8CJ40 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CroccQ8CJ40 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
CroccQ8CJ40 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CroccQ8CJ40 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CroccQ8CJ40 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CroccQ8CJ40 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CroccQ8CJ40 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CroccQ8CJ40 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.05■■□□□ 1.12
CroccQ8CJ40 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CroccQ8CJ40 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CroccQ8CJ40 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CroccQ8CJ40 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CroccQ8CJ40 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.03■■□□□ 1.12
CroccQ8CJ40 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CroccQ8CJ40 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CroccQ8CJ40 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CroccQ8CJ40 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CroccQ8CJ40 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CroccQ8CJ40 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CroccQ8CJ40 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CroccQ8CJ40 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CroccQ8CJ40 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22■■□□□ 1.11
CroccQ8CJ40 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CroccQ8CJ40 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CroccQ8CJ40 Gm45364-201ENSMUST00000210883 159 ntBASIC21.99■■□□□ 1.11
CroccQ8CJ40 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.99■■□□□ 1.11
CroccQ8CJ40 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CroccQ8CJ40 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CroccQ8CJ40 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CroccQ8CJ40 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CroccQ8CJ40 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CroccQ8CJ40 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.97■■□□□ 1.11
CroccQ8CJ40 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CroccQ8CJ40 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CroccQ8CJ40 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CroccQ8CJ40 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
CroccQ8CJ40 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CroccQ8CJ40 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CroccQ8CJ40 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.94■■□□□ 1.1
CroccQ8CJ40 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CroccQ8CJ40 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.94■■□□□ 1.1
CroccQ8CJ40 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CroccQ8CJ40 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CroccQ8CJ40 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CroccQ8CJ40 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CroccQ8CJ40 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CroccQ8CJ40 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CroccQ8CJ40 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.92■■□□□ 1.1
CroccQ8CJ40 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CroccQ8CJ40 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CroccQ8CJ40 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CroccQ8CJ40 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CroccQ8CJ40 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CroccQ8CJ40 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CroccQ8CJ40 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CroccQ8CJ40 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.89■■□□□ 1.1
CroccQ8CJ40 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.89■■□□□ 1.1
CroccQ8CJ40 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms