Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cpne3Q8BT60 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Cpne3Q8BT60 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.04■■□□□ 1.12
Cpne3Q8BT60 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpne3Q8BT60 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpne3Q8BT60 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cpne3Q8BT60 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.03■■□□□ 1.12
Cpne3Q8BT60 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cpne3Q8BT60 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cpne3Q8BT60 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Cpne3Q8BT60 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Cpne3Q8BT60 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.02■■□□□ 1.12
Cpne3Q8BT60 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Cpne3Q8BT60 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cpne3Q8BT60 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Cpne3Q8BT60 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cpne3Q8BT60 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cpne3Q8BT60 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
Cpne3Q8BT60 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22■■□□□ 1.11
Cpne3Q8BT60 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cpne3Q8BT60 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cpne3Q8BT60 Gm9939-201ENSMUST00000067161 1154 ntBASIC22■■□□□ 1.11
Cpne3Q8BT60 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpne3Q8BT60 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cpne3Q8BT60 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Cpne3Q8BT60 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpne3Q8BT60 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpne3Q8BT60 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpne3Q8BT60 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.97■■□□□ 1.11
Cpne3Q8BT60 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpne3Q8BT60 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cpne3Q8BT60 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.96■■□□□ 1.11
Cpne3Q8BT60 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Cpne3Q8BT60 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cpne3Q8BT60 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cpne3Q8BT60 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Cpne3Q8BT60 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpne3Q8BT60 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.95■■□□□ 1.1
Cpne3Q8BT60 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cpne3Q8BT60 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpne3Q8BT60 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpne3Q8BT60 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpne3Q8BT60 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpne3Q8BT60 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.94■■□□□ 1.1
Cpne3Q8BT60 Gm6821-201ENSMUST00000107540 542 ntBASIC21.93■■□□□ 1.1
Cpne3Q8BT60 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.93■■□□□ 1.1
Cpne3Q8BT60 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpne3Q8BT60 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpne3Q8BT60 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpne3Q8BT60 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne3Q8BT60 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne3Q8BT60 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne3Q8BT60 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne3Q8BT60 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne3Q8BT60 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Cpne3Q8BT60 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne3Q8BT60 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.91■■□□□ 1.1
Cpne3Q8BT60 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne3Q8BT60 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.89■■□□□ 1.1
Cpne3Q8BT60 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cpne3Q8BT60 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpne3Q8BT60 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpne3Q8BT60 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpne3Q8BT60 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.88■■□□□ 1.09
Cpne3Q8BT60 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpne3Q8BT60 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.87■■□□□ 1.09
Cpne3Q8BT60 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpne3Q8BT60 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpne3Q8BT60 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cpne3Q8BT60 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpne3Q8BT60 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpne3Q8BT60 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpne3Q8BT60 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cpne3Q8BT60 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpne3Q8BT60 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpne3Q8BT60 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpne3Q8BT60 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpne3Q8BT60 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cpne3Q8BT60 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpne3Q8BT60 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Cpne3Q8BT60 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpne3Q8BT60 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Cpne3Q8BT60 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpne3Q8BT60 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpne3Q8BT60 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpne3Q8BT60 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cpne3Q8BT60 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.81■■□□□ 1.08
Cpne3Q8BT60 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Cpne3Q8BT60 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.8■■□□□ 1.08
Cpne3Q8BT60 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cpne3Q8BT60 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cpne3Q8BT60 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms