Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smg1Q8BKX6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smg1Q8BKX6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smg1Q8BKX6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smg1Q8BKX6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Smg1Q8BKX6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.08■□□□□ 0.81
Smg1Q8BKX6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smg1Q8BKX6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smg1Q8BKX6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.07■□□□□ 0.8
Smg1Q8BKX6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smg1Q8BKX6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smg1Q8BKX6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smg1Q8BKX6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smg1Q8BKX6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smg1Q8BKX6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smg1Q8BKX6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smg1Q8BKX6 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.06■□□□□ 0.8
Smg1Q8BKX6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smg1Q8BKX6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smg1Q8BKX6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smg1Q8BKX6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smg1Q8BKX6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smg1Q8BKX6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smg1Q8BKX6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smg1Q8BKX6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smg1Q8BKX6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smg1Q8BKX6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Smg1Q8BKX6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.02■□□□□ 0.8
Smg1Q8BKX6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.8
Smg1Q8BKX6 Gm13238-201ENSMUST00000117655 780 ntBASIC20.01■□□□□ 0.79
Smg1Q8BKX6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smg1Q8BKX6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Smg1Q8BKX6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smg1Q8BKX6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smg1Q8BKX6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Smg1Q8BKX6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smg1Q8BKX6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smg1Q8BKX6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smg1Q8BKX6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.99■□□□□ 0.79
Smg1Q8BKX6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smg1Q8BKX6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smg1Q8BKX6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Smg1Q8BKX6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Smg1Q8BKX6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smg1Q8BKX6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smg1Q8BKX6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Smg1Q8BKX6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smg1Q8BKX6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Smg1Q8BKX6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.96■□□□□ 0.79
Smg1Q8BKX6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smg1Q8BKX6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smg1Q8BKX6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Smg1Q8BKX6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smg1Q8BKX6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smg1Q8BKX6 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smg1Q8BKX6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smg1Q8BKX6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smg1Q8BKX6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smg1Q8BKX6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Smg1Q8BKX6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smg1Q8BKX6 Gm9959-201ENSMUST00000068277 390 ntBASIC19.91■□□□□ 0.78
Smg1Q8BKX6 Amer2-203ENSMUST00000225247 2662 ntBASIC19.91■□□□□ 0.78
Smg1Q8BKX6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.91■□□□□ 0.78
Smg1Q8BKX6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smg1Q8BKX6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.91■□□□□ 0.78
Smg1Q8BKX6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smg1Q8BKX6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.9■□□□□ 0.78
Smg1Q8BKX6 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smg1Q8BKX6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smg1Q8BKX6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smg1Q8BKX6 Gm9812-201ENSMUST00000061934 968 ntBASIC19.9■□□□□ 0.78
Smg1Q8BKX6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Smg1Q8BKX6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Smg1Q8BKX6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smg1Q8BKX6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.89■□□□□ 0.77
Smg1Q8BKX6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Smg1Q8BKX6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smg1Q8BKX6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.88■□□□□ 0.77
Smg1Q8BKX6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Smg1Q8BKX6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smg1Q8BKX6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smg1Q8BKX6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Smg1Q8BKX6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smg1Q8BKX6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Smg1Q8BKX6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smg1Q8BKX6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Smg1Q8BKX6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.87■□□□□ 0.77
Smg1Q8BKX6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.87■□□□□ 0.77
Smg1Q8BKX6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.87■□□□□ 0.77
Smg1Q8BKX6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smg1Q8BKX6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Smg1Q8BKX6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smg1Q8BKX6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.86■□□□□ 0.77
Smg1Q8BKX6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smg1Q8BKX6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Smg1Q8BKX6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Smg1Q8BKX6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Smg1Q8BKX6 Gm43566-201ENSMUST00000196851 808 ntBASIC19.84■□□□□ 0.77
Smg1Q8BKX6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Smg1Q8BKX6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms