Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.23■■□□□ 1.15
Pcdh20Q8BIZ0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdh20Q8BIZ0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.23■■□□□ 1.15
Pcdh20Q8BIZ0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh20Q8BIZ0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh20Q8BIZ0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdh20Q8BIZ0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh20Q8BIZ0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Pcdh20Q8BIZ0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Pcdh20Q8BIZ0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdh20Q8BIZ0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh20Q8BIZ0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh20Q8BIZ0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdh20Q8BIZ0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdh20Q8BIZ0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdh20Q8BIZ0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdh20Q8BIZ0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdh20Q8BIZ0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Pcdh20Q8BIZ0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
Pcdh20Q8BIZ0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Pcdh20Q8BIZ0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh20Q8BIZ0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh20Q8BIZ0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdh20Q8BIZ0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.18■■□□□ 1.14
Pcdh20Q8BIZ0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.18■■□□□ 1.14
Pcdh20Q8BIZ0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh20Q8BIZ0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh20Q8BIZ0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh20Q8BIZ0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.17■■□□□ 1.14
Pcdh20Q8BIZ0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh20Q8BIZ0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh20Q8BIZ0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdh20Q8BIZ0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
Pcdh20Q8BIZ0 Gm11599-201ENSMUST00000118720 878 ntBASIC22.16■■□□□ 1.14
Pcdh20Q8BIZ0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.16■■□□□ 1.14
Pcdh20Q8BIZ0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh20Q8BIZ0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh20Q8BIZ0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdh20Q8BIZ0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh20Q8BIZ0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Pcdh20Q8BIZ0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh20Q8BIZ0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh20Q8BIZ0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh20Q8BIZ0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdh20Q8BIZ0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.14■■□□□ 1.14
Pcdh20Q8BIZ0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh20Q8BIZ0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh20Q8BIZ0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Pcdh20Q8BIZ0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdh20Q8BIZ0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh20Q8BIZ0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Pcdh20Q8BIZ0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdh20Q8BIZ0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
Pcdh20Q8BIZ0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh20Q8BIZ0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh20Q8BIZ0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Pcdh20Q8BIZ0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdh20Q8BIZ0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.12■■□□□ 1.13
Pcdh20Q8BIZ0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh20Q8BIZ0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh20Q8BIZ0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdh20Q8BIZ0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh20Q8BIZ0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdh20Q8BIZ0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.1■■□□□ 1.13
Pcdh20Q8BIZ0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
Pcdh20Q8BIZ0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh20Q8BIZ0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh20Q8BIZ0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh20Q8BIZ0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Pcdh20Q8BIZ0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Pcdh20Q8BIZ0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdh20Q8BIZ0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh20Q8BIZ0 Particl-201ENSMUST00000205370 1560 ntBASIC22.08■■□□□ 1.13
Pcdh20Q8BIZ0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh20Q8BIZ0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh20Q8BIZ0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh20Q8BIZ0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdh20Q8BIZ0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.06■■□□□ 1.12
Pcdh20Q8BIZ0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.06■■□□□ 1.12
Pcdh20Q8BIZ0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh20Q8BIZ0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh20Q8BIZ0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pcdh20Q8BIZ0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Pcdh20Q8BIZ0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh20Q8BIZ0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Pcdh20Q8BIZ0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Pcdh20Q8BIZ0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh20Q8BIZ0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh20Q8BIZ0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh20Q8BIZ0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pcdh20Q8BIZ0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pcdh20Q8BIZ0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms