Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim23Q8BGX0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.22■■□□□ 1.15
Trim23Q8BGX0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trim23Q8BGX0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim23Q8BGX0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim23Q8BGX0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trim23Q8BGX0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Trim23Q8BGX0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.21■■□□□ 1.15
Trim23Q8BGX0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.2■■□□□ 1.15
Trim23Q8BGX0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim23Q8BGX0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Trim23Q8BGX0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim23Q8BGX0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim23Q8BGX0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.19■■□□□ 1.14
Trim23Q8BGX0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim23Q8BGX0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.19■■□□□ 1.14
Trim23Q8BGX0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trim23Q8BGX0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trim23Q8BGX0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim23Q8BGX0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.18■■□□□ 1.14
Trim23Q8BGX0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Trim23Q8BGX0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trim23Q8BGX0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim23Q8BGX0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trim23Q8BGX0 Gm11175-201ENSMUST00000116172 543 ntBASIC22.17■■□□□ 1.14
Trim23Q8BGX0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim23Q8BGX0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim23Q8BGX0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.15■■□□□ 1.14
Trim23Q8BGX0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Trim23Q8BGX0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim23Q8BGX0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim23Q8BGX0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim23Q8BGX0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trim23Q8BGX0 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim23Q8BGX0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.14■■□□□ 1.13
Trim23Q8BGX0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trim23Q8BGX0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim23Q8BGX0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
Trim23Q8BGX0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim23Q8BGX0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim23Q8BGX0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim23Q8BGX0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim23Q8BGX0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim23Q8BGX0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trim23Q8BGX0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Trim23Q8BGX0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim23Q8BGX0 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.11■■□□□ 1.13
Trim23Q8BGX0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim23Q8BGX0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim23Q8BGX0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Trim23Q8BGX0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim23Q8BGX0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim23Q8BGX0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim23Q8BGX0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim23Q8BGX0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim23Q8BGX0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim23Q8BGX0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.1■■□□□ 1.13
Trim23Q8BGX0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim23Q8BGX0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim23Q8BGX0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim23Q8BGX0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim23Q8BGX0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim23Q8BGX0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trim23Q8BGX0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Trim23Q8BGX0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim23Q8BGX0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim23Q8BGX0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.08■■□□□ 1.13
Trim23Q8BGX0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim23Q8BGX0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Trim23Q8BGX0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim23Q8BGX0 Scarna2-201ENSMUST00000157560 414 ntBASIC22.07■■□□□ 1.12
Trim23Q8BGX0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim23Q8BGX0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Trim23Q8BGX0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim23Q8BGX0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim23Q8BGX0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
Trim23Q8BGX0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim23Q8BGX0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim23Q8BGX0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim23Q8BGX0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.06■■□□□ 1.12
Trim23Q8BGX0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Trim23Q8BGX0 Gm9806-201ENSMUST00000051080 552 ntBASIC22.05■■□□□ 1.12
Trim23Q8BGX0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim23Q8BGX0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim23Q8BGX0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim23Q8BGX0 Mir6538-201ENSMUST00000183713 110 ntBASIC22.04■■□□□ 1.12
Trim23Q8BGX0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim23Q8BGX0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Trim23Q8BGX0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Trim23Q8BGX0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim23Q8BGX0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim23Q8BGX0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.03■■□□□ 1.12
Trim23Q8BGX0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim23Q8BGX0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim23Q8BGX0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Trim23Q8BGX0 Terc-201ENSMUST00000082862 423 ntBASIC22.02■■□□□ 1.12
Trim23Q8BGX0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim23Q8BGX0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim23Q8BGX0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Trim23Q8BGX0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms