Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Negr1Q80Z24 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.2■□□□□ 0.82
Negr1Q80Z24 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Negr1Q80Z24 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Negr1Q80Z24 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Negr1Q80Z24 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Negr1Q80Z24 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Negr1Q80Z24 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Negr1Q80Z24 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.19■□□□□ 0.82
Negr1Q80Z24 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Negr1Q80Z24 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Negr1Q80Z24 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Negr1Q80Z24 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Negr1Q80Z24 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Negr1Q80Z24 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Negr1Q80Z24 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.18■□□□□ 0.82
Negr1Q80Z24 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.18■□□□□ 0.82
Negr1Q80Z24 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
Negr1Q80Z24 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Negr1Q80Z24 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Negr1Q80Z24 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Negr1Q80Z24 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Negr1Q80Z24 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Negr1Q80Z24 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Negr1Q80Z24 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Negr1Q80Z24 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Negr1Q80Z24 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Negr1Q80Z24 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Negr1Q80Z24 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Negr1Q80Z24 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Negr1Q80Z24 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Negr1Q80Z24 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Negr1Q80Z24 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Negr1Q80Z24 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Negr1Q80Z24 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Negr1Q80Z24 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Negr1Q80Z24 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Negr1Q80Z24 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Negr1Q80Z24 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Negr1Q80Z24 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Negr1Q80Z24 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Negr1Q80Z24 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.13■□□□□ 0.81
Negr1Q80Z24 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Negr1Q80Z24 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Negr1Q80Z24 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Negr1Q80Z24 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Negr1Q80Z24 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Negr1Q80Z24 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Negr1Q80Z24 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.11■□□□□ 0.81
Negr1Q80Z24 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Negr1Q80Z24 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Negr1Q80Z24 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Negr1Q80Z24 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Negr1Q80Z24 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Negr1Q80Z24 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Negr1Q80Z24 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Negr1Q80Z24 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Negr1Q80Z24 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Negr1Q80Z24 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Negr1Q80Z24 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Negr1Q80Z24 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Negr1Q80Z24 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.09■□□□□ 0.81
Negr1Q80Z24 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Negr1Q80Z24 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.08■□□□□ 0.8
Negr1Q80Z24 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Negr1Q80Z24 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Negr1Q80Z24 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Negr1Q80Z24 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Negr1Q80Z24 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.06■□□□□ 0.8
Negr1Q80Z24 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Negr1Q80Z24 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Negr1Q80Z24 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Negr1Q80Z24 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Negr1Q80Z24 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.04■□□□□ 0.8
Negr1Q80Z24 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Negr1Q80Z24 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.04■□□□□ 0.8
Negr1Q80Z24 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Negr1Q80Z24 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Negr1Q80Z24 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Negr1Q80Z24 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Negr1Q80Z24 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Negr1Q80Z24 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Negr1Q80Z24 Gm7432-201ENSMUST00000210343 879 ntBASIC20.03■□□□□ 0.8
Negr1Q80Z24 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Negr1Q80Z24 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Negr1Q80Z24 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Negr1Q80Z24 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.01■□□□□ 0.79
Negr1Q80Z24 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Negr1Q80Z24 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Negr1Q80Z24 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Negr1Q80Z24 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20■□□□□ 0.79
Negr1Q80Z24 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20■□□□□ 0.79
Negr1Q80Z24 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20■□□□□ 0.79
Negr1Q80Z24 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Negr1Q80Z24 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Negr1Q80Z24 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Negr1Q80Z24 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Negr1Q80Z24 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Negr1Q80Z24 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Negr1Q80Z24 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms