Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.79■■□□□ 1.72
Usp6nlQ80XC3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Usp6nlQ80XC3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Usp6nlQ80XC3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Usp6nlQ80XC3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.77■■□□□ 1.72
Usp6nlQ80XC3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Usp6nlQ80XC3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Usp6nlQ80XC3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Usp6nlQ80XC3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Usp6nlQ80XC3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Usp6nlQ80XC3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Terc-201ENSMUST00000082862 423 ntBASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Usp6nlQ80XC3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Usp6nlQ80XC3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Usp6nlQ80XC3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Usp6nlQ80XC3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Usp6nlQ80XC3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Gm10420-201ENSMUST00000121713 882 ntBASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
Usp6nlQ80XC3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Usp6nlQ80XC3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.71■■□□□ 1.71
Usp6nlQ80XC3 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.71■■□□□ 1.71
Usp6nlQ80XC3 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.71■■□□□ 1.71
Usp6nlQ80XC3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.7■■□□□ 1.71
Usp6nlQ80XC3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Usp6nlQ80XC3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp6nlQ80XC3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Usp6nlQ80XC3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp6nlQ80XC3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp6nlQ80XC3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Usp6nlQ80XC3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Usp6nlQ80XC3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Usp6nlQ80XC3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp6nlQ80XC3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp6nlQ80XC3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Usp6nlQ80XC3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Usp6nlQ80XC3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Usp6nlQ80XC3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Usp6nlQ80XC3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Usp6nlQ80XC3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Usp6nlQ80XC3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.63■■□□□ 1.69
Usp6nlQ80XC3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.63■■□□□ 1.69
Usp6nlQ80XC3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
Usp6nlQ80XC3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.62■■□□□ 1.69
Usp6nlQ80XC3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.62■■□□□ 1.69
Usp6nlQ80XC3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Usp6nlQ80XC3 Gm5921-201ENSMUST00000075898 882 ntBASIC25.61■■□□□ 1.69
Usp6nlQ80XC3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Usp6nlQ80XC3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Usp6nlQ80XC3 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.61■■□□□ 1.69
Usp6nlQ80XC3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Usp6nlQ80XC3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Usp6nlQ80XC3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Usp6nlQ80XC3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 Gm5812-201ENSMUST00000061073 957 ntBASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.59■■□□□ 1.69
Usp6nlQ80XC3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.58■■□□□ 1.69
Usp6nlQ80XC3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Usp6nlQ80XC3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Usp6nlQ80XC3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
Usp6nlQ80XC3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Usp6nlQ80XC3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp6nlQ80XC3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp6nlQ80XC3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Usp6nlQ80XC3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Usp6nlQ80XC3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.55■■□□□ 1.68
Usp6nlQ80XC3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Usp6nlQ80XC3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp6nlQ80XC3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Usp6nlQ80XC3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp6nlQ80XC3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Usp6nlQ80XC3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Usp6nlQ80XC3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Usp6nlQ80XC3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Usp6nlQ80XC3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Usp6nlQ80XC3 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.51■■□□□ 1.67
Usp6nlQ80XC3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.51■■□□□ 1.67
Usp6nlQ80XC3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC25.5■■□□□ 1.67
Usp6nlQ80XC3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Usp6nlQ80XC3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms