Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vrk1Q80X41 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vrk1Q80X41 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Vrk1Q80X41 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vrk1Q80X41 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Vrk1Q80X41 Gm14523-201ENSMUST00000117260 558 ntBASIC22.04■■□□□ 1.12
Vrk1Q80X41 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vrk1Q80X41 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vrk1Q80X41 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Vrk1Q80X41 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vrk1Q80X41 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vrk1Q80X41 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.03■■□□□ 1.12
Vrk1Q80X41 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vrk1Q80X41 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Vrk1Q80X41 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Vrk1Q80X41 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vrk1Q80X41 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Vrk1Q80X41 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Vrk1Q80X41 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vrk1Q80X41 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vrk1Q80X41 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Vrk1Q80X41 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Vrk1Q80X41 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vrk1Q80X41 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vrk1Q80X41 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Vrk1Q80X41 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Vrk1Q80X41 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vrk1Q80X41 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vrk1Q80X41 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Vrk1Q80X41 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Vrk1Q80X41 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.97■■□□□ 1.11
Vrk1Q80X41 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.97■■□□□ 1.11
Vrk1Q80X41 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Vrk1Q80X41 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.96■■□□□ 1.11
Vrk1Q80X41 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.95■■□□□ 1.1
Vrk1Q80X41 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vrk1Q80X41 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vrk1Q80X41 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vrk1Q80X41 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vrk1Q80X41 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Vrk1Q80X41 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vrk1Q80X41 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.94■■□□□ 1.1
Vrk1Q80X41 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Vrk1Q80X41 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.93■■□□□ 1.1
Vrk1Q80X41 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.93■■□□□ 1.1
Vrk1Q80X41 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vrk1Q80X41 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.93■■□□□ 1.1
Vrk1Q80X41 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.93■■□□□ 1.1
Vrk1Q80X41 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.93■■□□□ 1.1
Vrk1Q80X41 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vrk1Q80X41 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Vrk1Q80X41 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.92■■□□□ 1.1
Vrk1Q80X41 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vrk1Q80X41 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.91■■□□□ 1.1
Vrk1Q80X41 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Vrk1Q80X41 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vrk1Q80X41 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Vrk1Q80X41 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Vrk1Q80X41 Terc-201ENSMUST00000082862 423 ntBASIC21.89■■□□□ 1.09
Vrk1Q80X41 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Vrk1Q80X41 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vrk1Q80X41 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vrk1Q80X41 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vrk1Q80X41 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Vrk1Q80X41 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vrk1Q80X41 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vrk1Q80X41 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.87■■□□□ 1.09
Vrk1Q80X41 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.87■■□□□ 1.09
Vrk1Q80X41 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.87■■□□□ 1.09
Vrk1Q80X41 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vrk1Q80X41 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.87■■□□□ 1.09
Vrk1Q80X41 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vrk1Q80X41 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vrk1Q80X41 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Vrk1Q80X41 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vrk1Q80X41 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vrk1Q80X41 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.85■■□□□ 1.09
Vrk1Q80X41 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vrk1Q80X41 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.84■■□□□ 1.09
Vrk1Q80X41 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Vrk1Q80X41 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vrk1Q80X41 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vrk1Q80X41 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vrk1Q80X41 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vrk1Q80X41 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vrk1Q80X41 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Vrk1Q80X41 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vrk1Q80X41 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vrk1Q80X41 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Vrk1Q80X41 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vrk1Q80X41 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vrk1Q80X41 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vrk1Q80X41 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vrk1Q80X41 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vrk1Q80X41 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.81■■□□□ 1.08
Vrk1Q80X41 Gm10420-201ENSMUST00000121713 882 ntBASIC21.81■■□□□ 1.08
Vrk1Q80X41 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vrk1Q80X41 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vrk1Q80X41 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vrk1Q80X41 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms